The facilities at AIM are available for use by the entire NIH intramural research community. While we welcome users with any size imaging project, AIM specializes in large, yearlong (or longer), collaborative research efforts with NIH labs – providing sample preparation, microscope operation and development, and data processing/analysis as needed. We take care of the imaging and processing so that you can focus on the biology.
Microscope |
Description |
Spatial Resolution |
Speed (frames/s) |
Photodose |
Sample |
Instant structured illumination microscope (ISIM) |
Fast super-resolution |
<140nm lateral |
100 |
High |
Live or fixed. Small, thin samples like cells, organoids. |
Dual view Inverted Selective Plane Illumination Microscope (DISPIM) |
Fast, gentle, high resolution light sheet for live samples |
330nm isotropic |
100 |
Low |
Live or fixed. Cells, up to medium size, transparent samples like organoids, C. elegans, zebrafish. |
Cleared Tissue DISPIM |
Fast multi-view lightsheet for large, cleared tissue samples |
500nm isotropic |
100 |
Low |
Fixed and cleared. Up to 5mm thick slabs of tissue, up to 2cm x 3cm lateral size. |
Single Molecule TIRF/Inclined Illumination Microscope |
Variable inclination illumination single molecule imaging. Including STORM. |
20 nm lateral |
100 |
>High |
Live or fixed. Small, thin samples like cells. |
Interferometric Photoactivated Localization Microscope (IPALM) |
Localization microscope with unprecedented lateral and axial resolution. |
20 nm lateral |
Not suitable for live cells |
High |
Fixed and specially mounted. Small and thin samples like cells, bacteria. |
The DISPIM is a dual light sheet microscope that acquires two orthogonal views of a sample. These two views can then be fused and joint deconvolved to generate a single volume with high isotropic resolution. Like other light sheet microscopes, the DISPIM provides rapid volume imaging with a low photodose and is therefore ideally suited for long term or high repetition rate imaging in samples where phototoxicity/photobleaching can be a problem. Unlike conventional light sheet microscopes, the joint deconvolution process provides good resolution in all directions.
For more information, please visit theAIM DISPIM site.
The ISIM is a fluorescence microscope that combines rapid image acquisition (100Hz) with a resolution roughly double that of a confocal microscope in all three dimensions. Unlike other structured illumination microscopes, the resolution is enhanced via hardware in a single frame acquisition rather than computationally processing multiple images, effectively making this an ‘instantaneous’ structured illumination microscope. Recently, the Shroff Lab has extended the capability of this microscope to rapid, super-resolution TIRF.
For more information, please visit the AIM TIRF-SIM site.
Capable of unsurpassed optical resolution, this system is a clone of the original prototype developed at the Janelia Research Campus but offers 3 color capability. IPALM combines photoactivated localization microscopy with single-photon, simultaneous multiphase interferometry providing < 20 nm resolution in all three dimensions. This microscope is currently located in the Taraska Lab and will move to AIM once the facility is operational.
For more information, please visit the AIM IPALM site.
The high throughput single molecule microscope was designed to image large numbers of cell samples in a multi-well format. This microscope can routinely image up to 8 coverslips and 10,000+ cells per acquisition. An included analysis pipeline automatically segments images to identify nuclei, cell bodies, and puncta (RNAs, receptors, etc.) and generates statistics on these puncta (number/cell, co-expression, co-localization, etc.). This microscope is currently located in the Larson Lab and will move to AIM once the facility is operational.
For more information, please visit the AIM site.
This single molecule detection microscope is based on widefield illumination with the flexibility of tuning between TIRF and inclined illumination for different applications – enabling localization-based imaging techniques including single molecule tracking, PALM and dSTORM. The TIRF illumination enables the monitoring of single molecule interactions on the glass coverslips or the imaging of biomolecules in a very thin layer in live cells (mostly on the basal plasma membrane). With the live cell environment system, it also allows single molecule tracking in live cells.
For more information, please visit the AIM site.
AIM is a Trans-NIH shared resource open to all NIH investigators. For ll inquiries about AIM collaboration, please contact AIM directly. Please do not place a request through CREx.