Frederick, MD
Core Facility
Repositories
The Mouse Modeling Core assists NIH investigators by generating and preserving genetically-engineered mouse strains. Services include scientific consultation, gene-targeting in mouse embryonic stem cells, micro-injection of nucleic acids, proteins, or ES cells into mouse embryos, Read More...
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Bioinformatics
The tool HISAT2 will be used to align the trimmed hcc1395 FASTQ files to the human chromosome 22 reference. RNA sequencing analyses require the use of splice aware aligners in order to map sequences that span Read More...
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Bioinformatics
The tool HISAT2 will be used to align the trimmed hcc1395 FASTQ files to the human chromosome 22 reference. RNA sequencing analyses require the use of splice aware aligners in order to map sequences that span Read More...
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Bioinformatics
Now that we have downloaded the HBR and UHR dataset and know where analysis tools are, let's start learning about RNA sequencing, by first learning about our reference genome and annotation files. Let's Read More...
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Bioinformatics
Now that we have downloaded the HBR and UHR dataset and know where analysis tools are, let's start learning about RNA sequencing, by first learning about our reference genome and annotation files. Let's Read More...
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Bioinformatics
What is in the 22.gtf file? A gtf file is known as Genome Transfer File, which is essentially a tab delimited file (ie. columns in the file are separated by tab). It informs us of Read More...
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Bioinformatics
Lesson 9: Reference genomes and genome annotations used in RNA sequencing Before getting started, remember to be signed on to the DNAnexus GOLD environment. Lesson 8 Review In Lesson 8, we learned about the basics of RNA sequencing, Read More...
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Bioinformatics
Lesson 9: Reference genomes and genome annotations used in RNA sequencing Before getting started, remember to be signed on to the DNAnexus GOLD environment. Lesson 8 Review In Lesson 8, we learned about the basics of RNA sequencing, Read More...