NATIONAL CANCER INSTITUTE - CANCER.GOV

Core Resources

Bioinformatics Biostatistics and Computing

CCR Collaborative Bioinformatics Resource (CCBR)
Bethesda, MD

Core

Collaborative

Services Offered
Training Opportunities

The CCR Collaborative Bioinformatics Resource (CCBR) is a centrally-funded resource group which provides a mechanism for CCR researchers to obtain many different types of bioinformatics assistance to further their research goals. The group has expertise in a broad range of bioinformatics topics, and as such, its goal is to provide a simplified central access point for CCR researchers. Requests for any type of Bioinformatics support should be through the CCBR Project Submission Form. Types of Collaborative Expertise: Next Generation Sequence (NGS) data analysis (RNAseq, scRNAseq, ATAC-seq,… [learn more]

Manager, CCBR: Parthav Jailwala
Email: parthav.jailwala@nih.gov
Phone: (240) 760-6629
CCR Radiation Oncology Branch Bioinformatics Core
Bethesda, Maryland

Core

Collaborative

Services Offered
Training Opportunities

Radiation Oncology Branch is part of CCR. Bioinformatics core is a collaborative resource to support ROB branch and provide service to ROB investigators from NCI and other Institutes access to new technologies, bioinformatics, statistical analysis related to genetics/genomics, and offers access to in-house built software tools. Bioinformatics analysis: work with research scientists to provide consulting prior to experiments, analysis of high-throughput sequencing, gene expression, metabolomics, proteomics, and other biological data to identify: prognostic biomarkers, transcriptio… [learn more]

Associate Scientist: Uma Shankavaram
Email: uma@mail.nih.gov
Phone: (301) 496-6718
NCI Genomics and Pharmacology Facility
Bethesda, MD

Core

Collaborative

Training Opportunities

Established Technologies: The Miner Suite of Bioinformatic Applications, These applications are freely available for public use. Our characterization and analysis of the NCI-60 cancer cell lines, the DNA, RNA, protein, epigenetic and pharmacological levels is accessible through CellMiner, with the expended version including additional cell line sets available through CellMinerCDB., , CellMinerCDB, url:  https://discover.nci.nih.gov/rsconnect/cellminercdb/, CellMiner Cross Database (CDB) is the first web application to allow translational researchers to conduct analyses across all major… [learn more]

Manager: William Reinhold
Email: wcr@mail.nih.gov
Phone: (240) 760-7339
Statistical Support at ABCS
Frederick, MD

Core

Collaborative

Trans NIH

Services Offered
Training Opportunities

The centrally funded Statistics team within the Advanced Biomedical Computational Science group at the Frederick National Lab provides statistical consultation and data analysis support for NCI laboratories. We have broad-range expertise in biomedically relevant areas of applied and computational statistics, as well as related subjects. The team can help with both advanced and standard statistical analyses. These include data-sample comparisons (such as pairwise comparisons and ANOVA), linear or nonlinear regression, linear or nonlinear mixed-effects modeling, survival analysis, power and … [learn more]

Sr. Principal Computational Scientist: Brian Luke
Email: brian.luke@nih.gov
Phone: (301) 846-5553