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Citation: Belue M, et al. Academic Radiology 2024 Code Availability: https://github.com/NIH-MIP/Prostate-MRI_T2W_Quality
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Citation: Mehralivand S, et al. Academic Radiology 2022 Code Availability: https://github.com/Project-MONAI/research-contributions/tree/main/prostate-mri-lesion-seg
Frederick, MD
Collaborative
CCR VOLUME Electron Microscopy Core (CVEMC), formerly known as volume Electron Microscopy (vEM), aims to develop new techniques in volume electron microscopy (vEM) and, in collaboration with CCR Investigators, apply these techniques to research cell Read More...
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Many established and emerging technologies are available to CCR scientists. This technology-rich environment makes the CCR a unique place to conduct scientific research. Through the OSTR, the CCR continues to find Read More...
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Our Mission The Office of Science and Technology Resources (OSTR) catalyzes the advancement of cancer research through making innovative technologies and scientific resources accessible to scientists at the Center for Cancer Research (CCR). OSTR develops Read More...
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CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More New CREx Program Manager The CREx Team is happy to announce Deepika Velampati as the new CREx Program Read More...
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CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More NIH Intramural Core Resources NHGRI Flow Cytometry Core The Core performs high quality single cell analysis through the Read More...
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CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More New CREx User Survey The CREx Team is carrying out a CREx User Survey. We would greatly appreciate Read More...
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September 8, 2022 crex.nih.gov CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More Science & Technology Seminars and Training Events Upcoming Seminars and Educational Opportunities The following Read More...
Frederick, MD
Core Facility
The Advanced Biomedical Computational Sciences (ABCS) group provides technology development, scientific consultation, collaboration and training, research, software development, and high-performance computing support. ABCS encompasses specialized groups focusing on machine learning applied to the interpretation of 2 Read More...
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CREx News & Updates June 2021 Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More NIH Collaborative Research Exchange (CREx) News Site Spotlight FACILITY HIGHLIGHTS Visit here to learn about services from Read More...
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CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More New NIH Resource Spotlight The NIH Lab Managers Working Group have developed a new NIH-wide database of cold Read More...
Frederick, MD
Core Facility
The research conducted within the Synthetic Biologics Core (SBC) Facility has a dual role: Generate chemical biology tools and drug candidates for molecular targets identified by NCI research groups, Develop novel effective methods and tools Read More...
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CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More New NIH Resource Resources Derive Greater Insights and Accelerate your Research Using Bioinformatic Tools! CREx is an NIH Read More...
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Bioinformatics
07/22/2025 - Con ideration for protecting private data when training AI model i a topic of increa ing concern. During thi event, participant will di cu the u e of ynthetic data for privacy-pre erving AI.
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Bioinformatics
04/28/2025 - AI Club is a weekly meeting that explores various topics relating to AI and deep learning in biomedical sciences, typically in a seminar, workshop, or journal club format. AI Club is intended to be Read More...
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Bioinformatics
03/19/2025 - This one hour and a half online training provides an accessible introduction to artificial intelligence (AI) using MATLAB. Designed for beginners, the session covers fundamental concepts in AI and machine learning, introduces intuitive tools Read More...
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Bioinformatics
03/03/2025 - AI Club is a weekly meeting that explores various topics relating to AI and deep learning in biomedical sciences, typically in a seminar, workshop, or journal club format. AI Club is intended to be Read More...
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Bioinformatics
11/26/2024 - Cancer AI Conversations is a virtual event series featuring timely topics related to the application of artificial intelligence in cancer research. Moderator: Jayashree Kalpathy-Cramer, Ph.D., University of Colorado Additional information can be found Read More...
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Bioinformatics
11/13/2024 - In this webinar, Dana-Farber Cancer Institute’s Dr. Renato Umeton will explore the transformative journey of applying artificial intelligence (AI) solutions at scale, and in full compliance, bridging the gap between Big Read More...
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Bioinformatics
07/23/2024 - Cancer AI Conversations are virtual events featuring timely topics related to the application of artificial intelligence (AI) in cancer research. This discussion will focus on the impact of AI on cancer health disparities.& Read More...
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Bioinformatics
03/06/2026 - This 45-minute online Lunch and Learn training will help attendees develop their own customized strategy for responsibly incorporating generative artificial intelligence (AI) tools, such as ChatGPT, into their workflows. By the end Read More...
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Bioinformatics
02/20/2026 - This one-hour online training will cover the fundamentals, applications, and ethical considerations of Artificial Intelligence (AI). Attendees will explore key topics such as machine learning, deep learning, data handling, and real-world AI applications across Read More...
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Bioinformatics
02/05/2026 - Don’t miss this brand-new double-feature of two essential AI courses in one! We will start with AI Done Right: Ethics and Privacy to set the stage for understanding the AI landscape and the Read More...
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Bioinformatics
11/06/2025 - This 45-minute online Lunch and Learn training will help attendees develop their own customized strategy for responsibly incorporating generative artificial intelligence (AI) tools, such as ChatGPT, into their workflows. By the end of this Read More...
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Bioinformatics
10/23/2025 - This one-hour online training will cover the fundamentals, applications, and ethical considerations of Artificial Intelligence (AI). Attendees will explore key topics such as machine learning, deep learning, data handling, and real-world AI applications across Read More...
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Bioinformatics
09/24/2025 - Don’t miss this brand-new double-feature of two essential AI courses in one! We will start with AI Done Right: Ethics and Privacy to set the stage for understanding the AI landscape Read More...
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Bioinformatics
08/20/2025 - Join this two-part AI course starting with AI Done Right: Ethics and Privacy to set the stage and ending with Prompt Like a Pro: Getting the Most from AI with Effective Prompt Engineering to Read More...
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Bioinformatics
06/18/2025 - This 45-minute online Lunch and Learn training will help attendees develop their own customized strategy for responsibly incorporating generative artificial intelligence (AI) tools, such as ChatGPT, into their workflows. By the end Read More...
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Bioinformatics
06/11/2025 - This two-hour virtual roundtable discussion will cover development and implementation of artificial intelligence (AI) chatbots at NIH. A chatbot is a software application or web interface designed to have textual or spoken conversations and Read More...
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Bioinformatics
05/28/2025 - This one-hour online training will cover the fundamentals, applications, and ethical considerations of Artificial Intelligence (AI). Attendees will explore key topics such as machine learning, deep learning, data handling, and real-world AI applications across Read More...
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Bioinformatics
03/24/2025 - AI Club is a weekly meeting that explores various topics relating to AI and deep learning in biomedical sciences, typically in a seminar, workshop, or journal club format. AI Club is intended to be Read More...
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Bioinformatics
01/29/2025 - Join Dr. Douglas Flora, executive medical director of Oncology Services at St. Elizabeth Healthcare, to explore how artificial intelligence (AI) is revolutionizing cancer care through oncology. This event will cover: key AI terminology,& Read More...
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Bioinformatics
01/15/2025 - This one-hour online training will cover the fundamentals, applications, and ethical considerations of Artificial Intelligence (AI). Attendees will explore key topics such as machine learning, deep learning, data handling, and real-world AI applications across Read More...
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Bioinformatics
09/04/2024 - This one-hour session will introduce attendees to the world of Artificial Intelligence (AI) as we explore the fundamentals, applications, and ethical considerations of this transformative technology. Key topics will include machine learning, deep learning, Read More...
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Bioinformatics
08/27/2024 - This 45-minute online Lunch and Learn training will help attendees develop their own customized strategy for responsibly incorporating generative artificial intelligence (AI) tools, such as ChatGPT, into their workflows. By the end Read More...
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Bioinformatics
05/08/2024 - This one-hour session will introduce attendees to the world of Artificial Intelligence (AI) as we explore the fundamentals, applications, and ethical considerations of this transformative technology. Key topics will include machine learning, deep learning, Read More...
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Bioinformatics
01/23/2024 - NCI is launching the virtual Cancer AI Conversations series featuring multiple perspectives on timely topics and themes in artificial intelligence for cancer research! Each event features short talks from 2-4 subject matter Read More...
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Bioinformatics
03/13/2026 - This 45-minute online training provides a high-level overview of recent developments in artificial intelligence (AI). Each session highlights emerging trends, tools, and use cases in the evolving AI landscape, with an emphasis on practical Read More...
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Bioinformatics
01/27/2026 - A discussion examining the opportunities, risks, and real-world considerations of using generative AI in healthcare delivery.
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Bioinformatics
11/12/2025 - This 30-minute online training provides a high-level overview of recent developments in artificial intelligence (AI). Each session highlights emerging trends, tools, and use cases in the evolving AI landscape, with an emphasis on practical Read More...
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Bioinformatics
10/20/2025 - AI-Driven Spatial Transcriptomics Unlocks Large-Scale Breast Cancer Biomarker Discovery from Histopathology
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Bioinformatics
09/17/2025 - The rapid advancement of large language models is enabling a new generation of domain-specific agents capable of reasoning, retrieving, and acting in complex biomedical contexts. In this talk, Dr. Lu present two representative systems: Read More...
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Bioinformatics
09/11/2025 - This interactive 1.5-hour workshop introduces participants to prompt engineering for effective AI communication. Through engaging, collaborative activities, attendees will learn to design clear, specific prompts that yield high-quality AI outputs for both technical and Read More...
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Bioinformatics
09/11/2025 - This interactive 1.5-hour workshop introduces participants to prompt engineering for effective AI communication. Through engaging, collaborative activities, attendees will learn to design clear, specific prompts that yield high-quality AI outputs for both technical and Read More...
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Bioinformatics
07/02/2025 - Thi 45-minute online training provide a high-level overview of recent development in artificial intelligence (AI). Each e ion highlight emerging trend , tool , and u e ca e in the evolving AI land cape, with Read More...
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Bioinformatics
05/27/2025 - Agentic AI is a class of artificial intelligence that acts autonomously to make decisions and take actions to achieve specific goals. During this event, the participants will discuss the emerging role of AI agents Read More...
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Bioinformatics
05/05/2025 - AI Club is a weekly meeting that explores various topics relating to AI and deep learning in biomedical sciences, typically in a seminar, workshop, or journal club format. AI Club is intended to be Read More...
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Bioinformatics
04/07/2025 - AI Club is a weekly meeting that explores various topics relating to AI and deep learning in biomedical sciences, typically in a seminar, workshop, or journal club format. AI Club is intended to be Read More...
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Bioinformatics
03/10/2025 - AI Club is a weekly meeting that explores various topics relating to AI and deep learning in biomedical sciences, typically in a seminar, workshop, or journal club format. AI Club is intended to be Read More...
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Bioinformatics
02/24/2025 - AI Club is a weekly meeting that explores various topics relating to AI and deep learning in biomedical sciences, typically in a seminar, workshop, or journal club format. AI Club is intended to be Read More...
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Bioinformatics
02/10/2025 - AI Club is a weekly meeting that explores various topics relating to AI and deep learning in biomedical sciences, typically in a seminar, workshop, or journal club format. AI Club is intended to be Read More...
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Bioinformatics
02/03/2025 - AI Club is a weekly meeting that explores various topics relating to AI and deep learning in biomedical sciences, typically in a seminar, workshop, or journal club format. AI Club is intended to be Read More...
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Bioinformatics
01/27/2025 - AI Club is a weekly meeting that explores various topics relating to AI and deep learning in biomedical sciences, typically in a seminar, workshop, or journal club format. AI Club is intended to be Read More...
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Bioinformatics
01/13/2025 - AI Club is a weekly meeting that explores various topics relating to AI and deep learning in biomedical sciences, typically in a seminar, workshop, or journal club format. AI Club is intended to be Read More...
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Bioinformatics
01/06/2025 - AI Club is a weekly meeting that explores various topics relating to AI and deep learning in biomedical sciences, typically in a seminar, workshop, or journal club format. AI Club is intended to be Read More...
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Bioinformatics
10/07/2024 - This one hour training, presented by speakers from NIH Cloud Lab , will provide an overview of the generative artificial intelligence (AI) services across three major cloud service providers (CSPs), including Amazon Web Services (AWS), Read More...
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Bioinformatics
05/28/2024 - The symposium's goals are to explore the integration of AI in understanding and managing immunological data, foster a paradigm shift in how immunologists leverage AI to propel their research forward, and inform NIAID Read More...
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Bioinformatics
04/21/2024 - Looking for an introduction to artificial intelligence (AI) or an opportunity to expand on what you already know? Attend this workshop hosted by the NIH-funded Bridge2AI CHoRUS network and the University of Florida Read More...
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Bioinformatics
The Bioinformatics Training and Education Program is pleased to announce the Artificial Intelligence in Biomedical Research at NIH Seminar Series . Starting on Feb 29, these monthly events will be recorded and made available in the BTEP Read More...
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Bioinformatics
02/22/2024 - During this 90-minute training session, attendees will be introduced to the interface of MATLAB, develop a solid understanding of Artificial Intelligence (AI) fundamentals, and discover additional resources and support tailored for beginners. This is Read More...
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Bioinformatics
07/26/2023 - Community/Patient Engaged AI for Biomedical Research : This session showcases technologies and tools that foster patient engagement in cancer research. It builds upon the well-established tradition of community-based participatory research in the U.S. Read More...
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Bioinformatics
01/21/2026 - Alzheimer’s disease and related dementias (ADRD) remain a major health crisis with profound social and economic burdens. Innovative strategies are needed to identify genetic risk and protective factors, model disease mechanisms, Read More...
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Bioinformatics
09/23/2025 - There are many challenges associated with moving cancer AI originally developed in a research setting into a clinical setting, including into clinical trials. During this event, participants will discuss the integration of AI in Read More...
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Bioinformatics
09/11/2025 - This engaging 1.5-hour workshop explores the practical application of AI in cloud environments, focusing on the STRIDES initiative , NIH Cloud Lab , and SharePoint integration. Participants will gain valuable insights into leveraging these platforms for Read More...
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Bioinformatics
09/09/2025 - Join&nb p;the National Heart, Lung, and Blood In titute (NHLBI)&nb p;for a hybrid work hop to explore how medicine will be tran formed by the current artificial intelligence ( Read More...
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Bioinformatics
06/13/2025 - Dr. Fuhai Li,&nb p;A ociate Profe or at the chool of Medicine and Computer cience & Engineering, Wa hington Univer ity, will pre ent novel approache that combine large language Read More...
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Bioinformatics
05/29/2025 - Thi e ion i geared toward re earcher wanting to under tand and implement the kill and competencie needed to make biomedical and behavioral re earch data FAIR and AI-ready, including: FAIR principle and Read More...
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Bioinformatics
05/13/2025 - In this one hour and half hour online training, attendees will apply deep learning to brain MRI images. By the end of this training, attendees will be able to:& Read More...
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Bioinformatics
04/14/2025 - Gene set analysis (GSA) is essential in genomic research, yet traditional methods often lack transparency and produce contextually irrelevant results, making interpretation challenging. While large language models (LLMs) offer a promising solution for result Read More...
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Bioinformatics
04/02/2025 - Join Dr. Caroline Chung as she discusses the multifaceted process of integrating AI into healthcare, emphasizing the critical role of context at every stage. You will be equipped with insights and strategies for successful Read More...
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Bioinformatics
01/23/2025 - AI in Medicine: Focus on Deep Learning in Medical Genomics This series invites Principal Investigators, Senior Scientists, and Senior Clinicians to share cutting-edge research and developments in their fields. Each session includes a 20-30 Read More...
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Bioinformatics
11/13/2024 - This webinar will provide an overview of the generative artificial intelligence (AI) services across three major cloud service providers (CSPs) and the steps to follow for setting up AI chatbots in cloud environments with Read More...
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Bioinformatics
11/13/2024 - The National Library of Medicine (NLM) Division of Intramural Research (DIR) is pleased to welcome Manisha Desai, PhD, Section Chief of Biostatistics and Director of the Quantitative Sciences Unit at Stanford University School of Read More...
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Bioinformatics
07/17/2024 - In this one hour and half hour online training, attendees will apply deep learning to brain MRI images. By the end of this training, the attendees will be able to : Read More...
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Bioinformatics
06/12/2024 - Please join us on Wednesday, June 12, 2024, when Aaron Y. Lee, M.D., M.S.C.I., will present "The Current State of Transparency for AI Models and Datasets." The presentation starts at 11:00 Read More...
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Bioinformatics
06/11/2024 - Large language models (LLMs) are artificial intelligence (AI) algorithms that employ deep learning and extensive data sets to create new content. LLMs offer many possible applications in the biomedical field, such as the development Read More...
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Bioinformatics
05/28/2024 - NCI is launching the virtual Cancer AI Conversations series featuring multiple perspectives on timely topics and themes in artificial intelligence for cancer research! Each event features short talks from 2-4 subject matter Read More...
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Bioinformatics
05/15/2024 - To register to attend, you must log in to your SITC Cancer Immunotherapy CONNECT account. Don’t have an account? Create a free one . Join Dr. Karchin of the Johns Read More...
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Bioinformatics
05/06/2024 - Have you been looking for ways to use artificial intelligence (AI) in clinical practice but not sure where to start? Attend this webinar for tips from Dr. Anant Madabhushi on applying AI in precision Read More...
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Bioinformatics
05/02/2024 - To register to attend, you must log in to your SITC Cancer Immunotherapy CONNECT account. Don’t have an account? Create a free one . Join Dr. Mullin of the Roswell Read More...
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Bioinformatics
03/26/2024 - NCI is launching the virtual Cancer AI Conversations series featuring multiple perspectives on timely topics and themes in artificial intelligence for cancer research! Each event features short talks from 2-4 subject matter Read More...
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Bioinformatics
11/01/2023 - Analysis of medical images such as MRI, CT, X-ray and ultrasound requires a comprehensive environment for data access, visualization, processing, and algorithm development. MATLAB provides tools such as Medical Imaging Toolbox and Deep Learning Read More...
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Bioinformatics
02/27/2026 - This one hour and half hour online training will equip attendees with essential knowledge and skills for effective interactions with Large Language Model (LLM) AI chatbots. Explore the intricacies of prompt engineering and its Read More...
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Bioinformatics
02/26/2026 - If you use AI tools even occasionally, you’ve probably spent more time than you’d like rewriting prompts, tweaking outputs, or trying to remember “that one prompt Read More...
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Bioinformatics
01/22/2026 - Attend this webinar to learn more about XNAT Scout—a new extension of the XNAT imaging informatics platform that’s designed to close the gap between artificial intelligence (AI) model development and clinical deployment. Read More...
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Bioinformatics
10/30/2025 - This one hour and half hour online training will equip attendees with essential knowledge and skills for effective interactions with Large Language Model (LLM) AI chatbots. Explore the intricacies of prompt engineering and its Read More...
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Bioinformatics
06/25/2025 - Join tony Brook Univer ity&r quo; Dr. Joel altz a he di cu e : the role of pathology artificial intelligence (AI) in the creation of pathology imaging biomarker , including tumor infiltrating lymphocyte Read More...
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Bioinformatics
03/26/2025 - Developing artificial intelligence (AI) schemes to assist the clinician towards enabling precision medicine approaches requires development of objective markers that are predictive of disease response to treatment or prognostic of longer-term patient survival. The Read More...
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Bioinformatics
10/16/2024 - Dear Colleagues, Thanks to advances in single-cell genomics, researchers can construct large-scale organ atlases, giving you more accurate ways to study genetic mutations and alterations related to drug responses and disease. These Read More...
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Bioinformatics
09/26/2024 - Dr. Turkbey will discuss radiology, pathology, and multimodal AI models his NCI lab has developed for prostate cancer diagnosis and prognosis prediction.
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Bioinformatics
05/02/2024 - The explosion of biomedical big data and information in the past decade or so has created new opportunities for discoveries to improve the treatment and prevention of human diseases. As such, the field of Read More...
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Bioinformatics
03/19/2024 - Vinton “Vint” Cerf, Ph.D., is the special guest for the 2024 J. Edward Rall Cultural Lecture, The Promises and Perils of AI in Biomedical Research and Health Care Delivery. Dr. Read More...
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Bioinformatics
02/26/2026 - Scientific discovery is increasingly limited not by data availability, but by our ability to integrate evidence, generate hypotheses, and iteratively test them at scale. Recent advances in foundation models and large language models suggest Read More...
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Bioinformatics
01/16/2026 - Part of the Childhood Cancer Data Initiative (CCDI) Webinar Series During this webinar, experts from the USC Norris Comprehensive Cancer Center (NCCC) and Children's Hospital Los Angeles (CHLA) will present: An overview of Read More...
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Bioinformatics
01/16/2026 - Speakers: James Amatruda, M.D., Ph.D. David Buckley, Ph.D. Jennifer Cotter, M.D. Alexander Markowitz, Ph.D. Moderator: Warren Kibbe, Ph.D., FACMI During this webinar, experts from the USC Norris Comprehensive Read More...
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Bioinformatics
09/15/2025 - Since 2016, NCI and the U.S. Department of Energy (DOE) have engaged in a strategic, interagency collaboration to simultaneously accelerate advances in precision oncology and scientific computing, including the use of artificial intelligence. The Read More...
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Bioinformatics
07/09/2025 - From image analy i to federated learning and multimodal modeling, generative AI can be u ed to tudy ob ervational ucce ion acro cale and data type . At DCEG' Data cience and Engineering Re Read More...
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Bioinformatics
06/20/2025 - Emerging artificial intelligence—e pecially generative model and deep learning—i tran forming biomedical and biological cience. In thi talk, Profe or Juexin Wang of Indiana Univer ity will pre ent ca e tudie Read More...
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Bioinformatics
06/16/2025 - In 2017, Dr. Rol joined the World Health Organization' International Agency for Re earch on Cancer (IARC-WHO), motivated to improve equal acce to high-quality healthcare for everyone. Currently, he lead an IARC team dedicated to Read More...
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Bioinformatics
05/01/2025 - In this webinar, the participants will learn about application of machine learning methods, specifically geared towards predicting the toxicity of target molecules. They will gain insights into various machine learning techniques, fostering a comprehensive Read More...
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Bioinformatics
01/22/2025 - Alzheimer’s Disease (AD) presents significant challenges in prevention and treatment despite decades of research advancements. Innovative AI/ML approaches enable analysis of real-world data sources, such as electronic health records (EHRs) Read More...
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Bioinformatics
01/09/2025 - Alzheimer’s Disease (AD) presents significant challenges in prevention and treatment despite decades of research advancements. Innovative AI/ML approaches enable analysis of real-world data sources, such as electronic health records (EHRs) Read More...
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Bioinformatics
11/14/2024 - The accessibility of artificial intelligence/machine learning (AI/ML) tools has taken off in recent years. This democratization of advanced analytics has the potential to revolutionize predictive toxicology, especially for applications that generate massive, Read More...
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Bioinformatics
10/24/2024 - Recent advances in artificial intelligence (AI) have revolutionized the use of hematoxylin and eosin (H&E)-stained tumor slides for precision oncology, enabling data-driven approaches to predict molecular characteristics and therapeutic outcomes. In Read More...
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Bioinformatics
03/26/2024 - In this session, we will discuss the potential of GPUs, and when and why to use GPUs on the Frederick Research Computing Environment (FRCE). We will explore the possibilities of GPU-accelerated AI applications and Read More...
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Bioinformatics
03/12/2024 - In this webinar, the participants will learn about application of machine learning methods, specifically geared towards predicting the toxicity of target molecules. They will gain insights into various machine learning techniques, fostering a comprehensive Read More...
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Bioinformatics
01/23/2024 - In this session, we will discuss the potential of GPUs, and when and why to use GPUs on the Frederick Research Computing Environment (FRCE). We will explore the possibilities of GPU-accelerated AI applications and Read More...
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Bioinformatics
11/30/2023 - Greetings, NCI intramural researchers, Earlier this year we reached out to gather your input on the formation of a bioinformatics community within the NCI Intramural Research Program. Why create such Read More...
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Bioinformatics
10/13/2023 - Zhiyong Lu, Ph.D. will present AI in Medicine: Improving Access to Literature Data for Knowledge Discovery at the monthly Data Sharing and Reuse Seminar. The explosion of biomedical big data and Read More...
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Bioinformatics
10/05/2023 - Dr. Hoifung Poon is the General Manager at Health Futures of Microsoft Research and an affiliated professor at University of Washington Medical School. He leads biomedical AI research and incubation, with the overarching goal Read More...
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Bioinformatics
08/24/2023 - Attend this virtual junior investigator session and hear Oak Ridge National Lab’s Dr. Adam Spannaus and Stanford’s Dr. Chenchen Zhu describe how they use analyses and AI models Read More...
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Bioinformatics
04/03/2023 - Workshop Description: The application of AI to cancer research holds promise to accelerate new discoveries, enable early detection, improve diagnosis, and spur development of new therapies for cancer. Machine learning and other forms of Read More...
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Confocal
HALO HALO is a powerful 2D image analysis tool with AI capabilities to perform annotations and analysis on bright-field and immunofluorescent images for digital pathology and numerous other applications. It offers a set of algorithms Read More...
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Confocal
Wide-field microscopy This is the technical term for a conventional fluorescence microscope. Typically the entire field of view of the specimen is illuminated with excitation light and then all of the emitted fluorescence is collected Read More...
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Confocal
Home Please watch the following instructional video to learn how to order and reserve microscopes usinf BookItLab
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Confocal
Multicolor imaging Fluorescence imaging is used for protein localization and colocalization in 3D. Multi-color imaging is necessary to observe colocalization of several proteins in the same cell. Many fluorescent proteins are now available for multi-color Read More...
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Confocal
Our Mission The NCI Optical Microscopy Cores are instrumental in advancing cancer research through optical measurements and analysis. Serving the Center for Cancer Research community, which is home to approximately 250 Principal and Senior Investigators across 50 Read More...
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Confocal
Training Contact the LCBG Microscopy Core to discuss your experiment: Meet with Ross Lake, Core Head, to discuss your specific project. If the project is feasible, schedule an appointment to receive training and use the Read More...
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Confocal
Ross Lake, B.A.Core Headlaker@mail.nih.govBuilding 37, Room 1066240-760-6824 Ross Lake joined the Microscopy Core of the Laboratory of Genitourinary Cancer Pathogenesis (LGCP) in 2003. He became the Core Head of the Core Read More...
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Confocal
2024 Senatorov IS, Bowman J, Jansson KJ, Alilin AN, Capaldo BJ, Lake R, Riba M, Abbey YC, Mcknight C, Zhang X, Raj S, Beshiri ML, Shinn P, Ngyuyen H, Thomas CJ, Corey E, Kelly K. Castrate Read More...
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Confocal
Techniques The Laboratory of Cancer Biology and Genetics Microscopy Core houses multiple systems that can be used to analyze cell structure, protein expression, and cell dynamics using immunofluorescence. These include inverted epifluorescence microscopes, a confocal Read More...
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Confocal
Contact the LCBG Microscopy Core to discuss your experiment Please login to the Bookitlab with your NIH credentials and register as user. Once you have registered on the website, coordinate a Read More...
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Confocal
Zeiss LSM980 with Airyscan 2 Confocal Microscope Inverted microscope Two PMTs and four GaAsP detectors for confocal imaging 4 color Airyscan 2 “super-resolution” detector Airyscan Multiplex modes for increased acquisition speed with high sensitivity 5x, 10x, 20x, 40x, 63 Read More...
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Confocal
Our Team Tatiana S. Karpova Ph.D.Core Headkarpovat@nih.govBuilding 41, Room C615240-760-6637 David A. Ball Ph.D.Core Biologistballa@nih.govBuilding 41, Room B114D240-760-6577 Mohamadreza Fazel, Ph.D.Core Biologistmohamadreza. Read More...
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Confocal
Software Image Acquisition Commercial imaging systems of LRBGE Optical Microscopy Core are controlled by acquisition software specifically designed for the appropriate microscope, such as ZEN (Zeiss confocal microscopes), Nikon Elements (Nikon), Imspector (Abberior). Custom-built HILO Read More...
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Confocal
General Usage Policies Principal investigators should read this document and sign it. PI’s/postdocs should attach a short-written summary of the project to the signed doc. If the project changes, Read More...
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Confocal
WIDE-FIELD MICROSCOPY Nikon Ti 2000 wide-field microscope Capabilities: This microscope is suited for live cell imaging (4D) and fixed cells (3D) imaging. This microscope produces high quality wide-field images that may be improved by Read More...
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Confocal
Sandeep Pallikkuth, Ph.D Staff Scientist sandeep.pallikkuth@nih.gov Itoro Akpan, M.S. Biologist akpanio@nih.gov
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Confocal
2024 L. Balagopalan, T. Moreno, H. Qin, B. C. Angeles, T. Kondo, J. Yi, K. M. McIntire, N. Alvinez, S. Pallikkuth, M. E. Lee, H. Yamane, A. D. Tran, P. Youkharibache, R. E. Cachau, N. Taylor, Read More...
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Confocal
Software LAS Leica Application Suite X (LAS X) is the one software platform for all Leica microscopes: It integrates confocal, wide field, stereo, super-resolution, and light-sheet instruments from Leica Microsystems. MetaMorph The MetaMorph® Microscopy Automation Read More...
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Leica SP8 LSCM with white light laser The SP8 LIGHTNING confocal microscope allows you to make proper and detailed observations of fast biological processes. Your experimental work will have the benefit of super-resolution, high-speed imaging, Read More...
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Jan Wisniewski, Ph.D.Head of EIB Microscopy and Digital Imaging Facilitywisniewj@nih.govBuilding 10, Room 4A05240-858-3605 Dr Wisniewski received his Ph.D. from the Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Read More...
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2024 Kim G, Chen Z, Li J, Luo J, Castro-Martinez F, Wisniewski J, Cui K, Wang Y, Sun J, Ren X, Crawford SE, Becerra SP, Zhu J, Liu T, Wang S, Zhao K, Wu Read More...
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Macro’s for Image Processing Dr. Wisniewski wrote a number of custom ImageJ Macros aimed at streamlining image processing tasks such as: Software Imaris The world’s leading Interactive Microscopy Image Analysis software company, actively Read More...
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Sign-Up for Microscopes and Computers Sign-up for EIB Microscopy Facility microscopes and image processing workstations is mandatory – please e-mail facility manager (“Contact” tab) and include your preferred date/time etc. Your request will be confirmed Read More...
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Zeiss LSM 880 NLO Laser Scanning Microscope Laser scanning microscope: 355nm UV laser 405nm, 594nm, 561nm and 633nm diode lasers Argon laser (458nm, 488nm and 514nm lines) Coherent Chameleon Vision II tunable (680nm – 1080nm) IR multiphoton Read More...
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Gianluca Pegoraro, PhD gianluca.pegoraro@nih.gov Facility Head 240-760-6696 Bldg. 41, Room B909 Dr. Pegoraro received his Ph.D. in Molecular Genetics from the International School of Superior Studies in Trieste, Italy in 2004. After Read More...
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Gianluca Pegoraro, PhD gianluca.pegoraro@nih.gov Facility Head 240-760-6696 Bldg. 41, Room B909 Dr. Pegoraro received his Ph.D. in Molecular Genetics from the International School of Superior Studies in Trieste, Italy in 2004. After Read More...
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HiTIF Protocols Cell Fixation PFA Cell Fixation with the Blue Washer Cell Seeding Seeding Cells in the imaging plates using the Multidrop Combi Functional Genomic Screens RNAi/CRISPR-KO Screen Assay Development SOP siRNA/sgRNA Spotting Read More...
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Image Analysis Signals Imaging Artist Next generation image analysis and management platform for high-content screening and cell imaging data. Quickly process, analyze, share, and store the vast volumes of data. Cell Profiler CellProfiler is free, Read More...
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2025 Sebastian R, Sun EG, Fedkenheuer M, Fu H, Jung S, Thakur BL, Redon CE, Pegoraro G, Tran AD, Gross JM, Mosavarpour S, Kusi NA, Ray A, Dhall A, Pongor LS, Casellas R, Aladjem MI. Mechanism Read More...
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A typical HTI screening project at HiTIF can be subdivided in 5 phases: Pre-Development The investigator contacts the Facility Head to inquire about the current availability of instrumentation time and manpower for the project to be Read More...
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Yokogawa CV8000 High-throughput spinning disk confocal microscope The Yokogawa CV8000 is HiTIF second high-throughput imaging system. The CV8000 feature set is similar to the CV7000.When compared to the latter, the CV8000 has a newer Read More...
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Training We recommend that users become familiar with the principals of fluorescence labeling and optical microscopy before arranging for training. We recommend the following sites for learning about microscopy: Introductions to Fluorescence Microscopy Fluorescence Labeling Read More...
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Stephen Lockett, Ph.D. Director, OMAC locketts@nih.gov 301-846-5515 Valentin Magidson, Ph.D. Scientist magidsonv@mail.nih.gov 301-846-6092 Will Heinz, Ph.D. Scientist heinzwf@nih.gov 301-846-1239 OMAC Read More...
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Confocal Microscope Image of Fixed Mouse Embryonic Fibroblast (MEF) Cells Actin proteins (stained red) and Tubulin proteins (stained green) are involved in a number of cellular process such as cell motility, cell division and maintenance Read More...
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2024 Coutinho, L. L., Femino, E. L., Gonzalez, A. L., Moffat, R. L., Heinz, W. F., Cheng, R. Y. S., Lockett, S. J., Rangel, M. C., Ridnour, L. A. & Wink, D. A. NOS2 and Read More...
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Image Analysis Capabilities: Custom Development Software Supported Software Platforms Arivis Vision 4D Arivis is software for image processing, analysis, and display for working with multi-channel 2D, 3D and 4D images of almost unlimited size independent Read More...
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ZEISS Elyra 7 with Lattice SIM² Type: Wide-field structured illumination microscope Capabilities: Super resolution 2D and 3D imaging of live or fixed cells Apotome SIM: 170 nm lateral, 450 nm axial Apotome SIM2: 140 nm lateral, 300 nm axial Lattice Read More...
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Research Mission The goal of OMAC’s research is to understand molecular mechanisms driving carcinogenesis and the reversal of this process through treatment, by utilization and advancement of optical microscopy techniques. These techniques include Read More...
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Our Team Michael Kruhlak, Ph.D.Core Headkruhlakm@nih.govBuilding 37, Room B114E240-858-3342 Dr. Kruhlak received his Ph.D. from the Department of Biochemistry and Molecular Biology at The University of Calgary Medical Read More...
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Image Processing Capabilities: Please contact Michael Kruhlak if you have any questions regarding image analysis.
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iLab The NCI Microscopy Core is using a new system to reserve a microscope. Use this link to access the iLab software. Training Contact the CCR Microscopy Core to Discuss your Experiment: Registration and Making Read More...
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2024 Mizunuma M, Redon CE, Saha LK, Tran AD, Dhall A, Sebastian R, Taniyama D, Kruhlak MJ, Reinhold WC, Takebe N, Pommier Y. Acetalax (Oxyphenisatin Acetate, NSC 59687) and Bisacodyl Cause Oncosis in Triple-Negative Breast Read More...
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Software Several software packages are available to users Arivis Vision 4D Arivis Vision4D is a modular software for working with multi-channel 2D, 3D and 4D images of almost unlimited size independent of Read More...
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Contact the CCR Microscopy Core to discuss your experiment Thank you for your interest in using the CCR Microscopy Core. Please login to the iLab with your NIH credentials and register as user. Once you Read More...
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Nikon SoRa Spinning Disk Capabilities: Inverted microscope Photo-metrics BSI sCMOS camera Yokogawa SoRa CSU-W1 spinning disk unit Super-resolution, confocal and wide-field imaging modes 4x, 10x, 20x and 60x objective lenses Mad City Labs 500 mm piezo Read More...
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Chris Combs, Ph.D. Facility Head Address: Bldg. 10 Rm 6n-309 10 Center Dr Bethesda, MD 20892 combsc@nhlbi.nih.gov Phone: 301.480.4078 Tatiana Karpova, Ph.D. Facility Head Address: Bldg. 41 Rm C615 41 Center Dr Bethesda, MD 20892 Read More...
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General Microscopy Resources Confocal Listserv Email discussion list focused on confocal microscopy, but also including topics on fluorescence microscopy and digital imaging. MicroscopyU Online learning platform by Nikon. An online source for Microscopy education. Leica Read More...
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Optical Microscopy Core of the Experimental Immunology Branch (CCR/NCI) announces the introductory classes to Image J/FIJI: December 16th and 18th, 2020, 10 am to 4 pm with 1 hr break. Dr. Jan Wisniewski “Streamline Your Image Analysis: Read More...
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2024 Date: Tuesday, October 15, 2024 Time and Location: 11 am EST, ZOOM (INVITATION BY LMIG LIST SERVER) Speaker: Dr. Diego Presman (U Buenos Aires) Title: “Insights on Glucocorticoid Receptor Activity Through Live Cell Imaging” Summary: Eucaryotic transcription factors ( Read More...
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PLEASE, JOIN US AT LMIG ZOOM SEMINAR! DATE: Tuesday, January 14th, 2025 TIME AND LOCATION: 11 am EST, ZOOM (INVITATION BY LMIG LIST SERVER)Dr. Yun-Xing Wang (NIH/NCI) “Determining 3D structures of individual molecules in Read More...
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PLEASE, JOIN US AT LMIG ZOOM SEMINAR! DATE: Tuesday, January 14th, 2025 TIME AND LOCATION: 11 am EST, ZOOM (INVITATION BY LMIG LIST SERVER) Dr. Yun-Xing Wang (NIH/NCI) “Determining 3D structures of individual Read More...
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How do I determine which EM technique should be used for my research? Schedule a free consultation with the Head of EMC, Dr. Ru-ching Hsia, to discuss the aim of your research project. Dr.& Read More...
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empanada v1.2 now released empanada-napari now comes with: MitoNet v1, NucleoNet v0.1 and DropNet v0.1(and other new useful modules) Empanada (EM PANoptic Any Dimension Annotation) is a tool Read More...