Atlanta, GA
Trans NIH Facility
The NIH Tetramer Core Facility (TCF) provides custom synthesis and distribution of soluble major histocompatibility complex (MHC)-peptide tetramer reagents that can be used to detect antigen-specific T cells. Approved investigators pay all shipping and Read More...
Bethesda, MD
Trans NIH Facility
The Center for Inherited Disease Research (CIDR)'s mission is to support the genetics community by providing high-quality, cutting-edge genomics services and technologies in order to expand our understanding of disease and catalyze discoveries that Read More...
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Total end-to-end system for single-cell research [embed]https://youtu.be/vMzhSzg1rUw[/embed] The BD Rhapsody Single-Cell Analysis system empowers and streamlines your research with a complete system of tools, including reagents and analysis software, Read More...
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What is Xenium? Xenium is a high-resolution, imaging-based in situ spatial profiling technology from 10x Genomics that allows for simultaneous expression analysis of RNA targets (currently in range of 100’s) within the same tissue section. Read More...
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Employing spatial biology techniques enables acquisition of transcript and protein data from intact tissue sections, and in turn, spatial distribution information and cellular interaction patterns are revealed.
Bethesda, MD
Collaborative
The NCI Clinical Research Correlatives Core provides non-CLIA-certified spectral flow cytometric assays to support clinical trials conducted in the CCR. The core specializes in immunophenotyping and immune monitoring assays. Established Technologies Spectral flow cytometry (Cytek), Read More...
Federick, MD
Core Facility
The Mass Cytometry Core (MCC) provides access to cutting-edge platforms and expert technical support for high-dimensional single-cell analysis and spatial proteomic profiling. A central expertise of the core is Imaging Mass Cytometry (IMC), which allows Read More...
Frederick, MD
Core Facility
Clinical Support Laboratory – Flow Cytometry Section is a laboratory specializing in providing immunophenotyping support of NCI intramural clinical trials, though assessments may also be performed using cells from Non-human primates and other species. The CSL Read More...
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The Center for Advanced Tissue Imaging (CAT-I) is an NIAID and NCI supported effort involving collaborative studies between experts in the Laboratory of Immune System Biology, DIR, NIAID and investigators in the DIR, NIAID and Read More...
Frederick, MD
Core Facility
Protein and Metabolite Characterization Core (PMCC), formerly known as the Protein Characterization Lab (PCL), offers various technologies to CCR investigators to characterize proteins and metabolites. The core develops and applies state-of-the-art analytical technologies, primarily mass Read More...
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CREx News & Updates April 2022 Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More Click below to learn how easy it is to navigate the CREx platform. These short videos will Read More...
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Bioinformatics
The Jupyter Lab Interface is divided into an explorer panel where users can access files and a panel where users will work with notebooks. It is the notebooks where users work with code and document Read More...
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Bioinformatics
01/15/2026 - This lesson introduces general recommendations and tips to consider when creating effective and reproducible visualizations. Additional topics to be discussed include multi-figure panels, complementary or related R packages, and the use of ggplot2 in Read More...
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Bioinformatics
Scientific journals almost always have limits on the number of figures that can be included in a publication. Don't fret, in lesson 6, we will focus on generating sub plots and multi plot figure panels Read More...
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Bioinformatics
save_plot('airwayc_cplot.png',labp, base_asp=0.85,base_height=10.5,bg = "white") The save_plot() function by cowplot is a bit more dynamic for multi-figure panels, but you may also use ggsave() .
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Bioinformatics
04/06/2022 - In this seminar, Dr. Malachi Griffith will: introduce neoantigens, a promising area for cancer immunotherapy and precision medicine . describe how immunogenomic and bioinformatic approaches are helping to identify neoantigens and therapeutic modalities to target Read More...
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Bioinformatics
06/09/2020 - The presentation will cover cfDNA sequencing capabilities and what has been learned in quality control and ways to measure successful assays through the group's efforts to develop and validate processes for comprehensive (exome) Read More...
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Bioinformatics
To start a new Jupyter Notebook, click on any of the available panels under the "Notebook" section in the Launcher. Each of the panels represent a notebook that will work with a specific Read More...
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Bioinformatics
To start a new Jupyter Notebook, click on any of the available panels under the "Notebook" section in the Launcher. Each of the panels represent a notebook that will work with a specific Read More...
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Bioinformatics
Heatmap and dendrogram can reveal clusters of genes whose expression is up or down-regulated under certain biological conditions and from the visualization below, it is clear that there are panels of genes that are upregulated Read More...
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Bioinformatics
10/03/2023 - Multiplexed antibody-based imaging enables the detailed characterization of molecular and cellular organization in tissues. Significant advances in the field now allow high-parameter data collection (60+ targets); however, considerable expertise and capital are needed to validate Read More...
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Bioinformatics
04/27/2023 - Scientific journals almost always have limits on the number of figures that can be included in a publication. Don't fret, in the 6th and final lesson of the Data Visualization with R course Read More...
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Bioinformatics
You can nest figures by combining figures using plot_grid() , saving that to an object, and then plotting those pre-combined figures with another figure using plot_grid() again. Shared legends can be obtained using cowplot' Read More...
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Bioinformatics
We can add a spacer using plot_spacer() to add blank sections to our plot. These blank sections are the size of our figure panels and may be different depending on how the plot is Read More...
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Bioinformatics
We can add a spacer using plot_spacer() to add blank sections to our plot. These blank sections are the size of our figure panels and may be different depending on how the plot is Read More...
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Bioinformatics
10/19/2022 - Speaker: Ron Germain, M.D., Ph.D. NIH Distinguished Investigator NIAID, NIH Dr. Germain received his Sc.B. and Sc.M. from Brown University in 1970 and his M.D. and Ph.D. from Harvard Read More...
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Bioinformatics
You have to VPN using Cisco AnyConnect Secure Mobility Client . Click Connect button and follow usual instructions. Following NoMachine Installation for Biowulf , double click the connection shortcut. You should see something like below. Fill in Read More...
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Bioinformatics
Running RStudio on Biowulf with NoMachine Using NoMachine to run Rstudio on Biowulf has the benefit of accessing data on the Biowulf/Helix drives. This comes at the cost of setup time and slower responsiveness. Read More...
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Bioinformatics
Intelligent and automated flow cytometry panel designer for traditional and spectral cytometers EasyPanel is an easy-to-use, fully automated panel designer for flow cytometry that is integrated with an automated Antibody Stock management system. The tool Read More...
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Bioinformatics
03/06/2024 - The National Institutes of Health (NIH) promotes the use of Common Data Elements (CDEs) to standardize data collection, sharing, and interoperability in health and disease research. In line with Congressional Appropriations language, the Office Read More...
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Bioinformatics
11/29/2022 - CIViC (Clinical Interpretation of Variants in Cancer, www.civicdb.org) is a free and open resource for curation and distribution of cancer variant knowledge which employs crowdsourced curation and expert moderation from published literature Read More...
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Bioinformatics
08/17/2020 - Speaker: Dr. Mary Carrington The exceptional influence of HLA and related genes located in the MHC on human disease relative to that of variation in the rest of the genome has now been clearly Read More...
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Bioinformatics
11/12/2024 - Join us at the upcoming hybrid NIH BRAIN NeuroAI Workshop on November 12 and 13, with virtual access to in-person panels and discussions at the NIH Campus in Bethesda, MD. Artificial intelligence (AI) is reshaping technology Read More...
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Bioinformatics
Course Overview Welcome to the Data Visualization with R Series A series of lessons designed to introduce learners to the R package ggplot2 This course will include a series of lessons for scientists with beginner Read More...
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Bioinformatics
Multi-figure panel Objectives Combine multiple plots into a single figure Learn how to use patchwork and cowplot The primary purpose of this lesson is to learn how to combine multiple figures into a single multi-panel Read More...
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Bioinformatics
Objectives Combine multiple plots into a single figure Learn how to use aspects of cowplot and patchwork The primary purpose of this lesson is to learn how to combine multiple figures into a single multi-panel Read More...
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Bioinformatics
04/05/2022 - Welcome to the Data Visualization with R course series ! Here, we hope to help you establish the foundations for generating publication quality plots in R. We will mostly be using ggplot2 ( https://ggplot2.tidyverse. Read More...
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Bioinformatics
Fugu is an open source and graphical based application for Mac users that can be used for data transfer between local and high performance compute systems such as Biowulf. To obtain Fugu, refer to the Read More...
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Bioinformatics
Fugu is an open source and graphical based application for Mac users that can be used for data transfer between local and high performance compute systems such as Biowulf. To obtain Fugu, refer to the Read More...
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Bioinformatics
Listed below are the video recordings of past BTEP events (classes, seminars, workshops). Videos are hosted on various servers and may play slightly differently. Some videos may be downloaded for local viewing. Recorded Videos of Read More...
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Bioinformatics
02/21/2017 - This BTEP Workshop will cover the fundamentals and best practices of Exome-Seq analysis, including downstream interpretation of variants using a variety of in-house and NCI-licensed software solutions. There will be hands-on training on CCBR Read More...