Bethesda, MD
Trans NIH Facility
The NIH MRI Research Facility (NMRF) is a shared, intramural resource for human imaging studies. The NMRF is supported by all Institutes at NIH and reports to the Shared Resources Subcommittee (SRS) of the Scientific Read More...
Frederick, MD
Core Facility
The function of the SAIP is to collaborate with NCI investigators in the development of mouse models, new molecular imaging probes for early detection and therapy, monitor tumors in vivo, and perform drug efficacy studies Read More...
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Citation: Mehralivand S, et al. Academic Radiology 2022 Code Availability: https://github.com/Project-MONAI/research-contributions/tree/main/prostate-mri-lesion-seg
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Citation: Belue M, et al. Academic Radiology 2024 Code Availability: https://github.com/NIH-MIP/Prostate-MRI_T2W_Quality
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Citation: Lay NS et al. Medical Physics 2023 Code Availability: https://github.com/ NIH-MIP/WSI_LungTumorSeg
Bethesda, MD
Trans NIH Facility
The Clinical Image Processing Service (CIPS) offers timely and accurate advanced image processing of diagnostic radiology images for clinical care, research, and training. CIPS’ functions include clinical services and scientific researches. Established Technologies CIPS can Read More...
Bethesda, MD
Trans NIH Facility
The Mouse Imaging Facility (MIF) is a shared, trans-NIH intramural resource for animal imaging studies. MIF provides access to state-of-the-art radiological imaging methods optimized for mice, rats, other animals, and tissue samples. MIF provides intellectual, Read More...
Bethesda, MD
Trans NIH Facility
Radiology and Imaging Sciences provides imaging services for National Institutes of Health (NIH) Clinical Center patients participating in research protocols conducted by the various NIH institutes. Services include X-rays, fluoroscopy, ultrasound, magnetic resonance imaging (MRI) Read More...
Bethesda, MD
Trans NIH Facility
The Neurorehabilitation and Biomechanics Research Section (also referred to as the NAB LAB) is a multidisciplinary group of highly qualified scientists, clinical and technical staff, and trainees with diverse backgrounds including medical, physical therapy, neuroscience Read More...
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CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More New NIH Resource Resources Advance your research with the NIH Mouse Imaging Facility (MIF) The NIH Mouse Imaging Read More...
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October 6, 2022 crex.nih.gov CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More Science & Technology Seminars and Training Events Upcoming Seminars and Educational Opportunities The following Read More...
Frederick, MD
Repositories
TCIA is a service which de-identifies and publishes medical images of cancer for download. New data proposals are reviewed by an Advisory Group on a quarterly basis. The data are organized as “collections”; typically, patients’ Read More...
Frederick, MD
Core Facility
The research conducted within the Synthetic Biologics Core (SBC) Facility has a dual role: Generate chemical biology tools and drug candidates for molecular targets identified by NCI research groups, Develop novel effective methods and tools Read More...
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CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More New NIH Resource Resources Derive Greater Insights and Accelerate your Research Using Bioinformatic Tools! CREx is an NIH Read More...
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CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More New NIH Resource Spotlight The NIH Lab Managers Working Group have developed a new NIH-wide database of cold Read More...
Bethesda, MD
Trans NIH Facility
In support of Intramural Research Program (IRP) scientists, DOHS provides training, consulting, and resources to ensure that laboratory equipment is used and maintained properly and safely. We provide expert safety and health consulting support for Read More...
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CREx News & Updates August 2022 Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More Site Spotlight NCATS Functional Genomics Laboratory (FGL) FGL is designed to help NIH Investigators use the latest Read More...
Rockville, MD
Core Facility
The Chemistry and Synthesis Center (CSC) of the National Heart, Lung, and Blood Institute (NHLBI) provides IRP scientists with targeted imaging probes and chemical tools that help accelerate cell-based assays, in vivo imaging studies, and Read More...
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CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More NIH Research Festival The NIH Research Festival highlights the groundbreaking science and the vibrant NIH community driving our Read More...
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September 8, 2022 crex.nih.gov CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More Science & Technology Seminars and Training Events Upcoming Seminars and Educational Opportunities The following Read More...
Bethesda, Maryland
Core Facility
The Magnetoencephalography (MEG) Core Facility specializes in MEG, a non-invasive procedure similar to electroencephalography (EEG), and aims to support research to better understand of the functioning of the brain. Established Technologies Magnetoencephalography (MEG) is a Read More...
Bethesda, MD
Collaborative
The CCR Collaborative Bioinformatics Resource (CCBR) is a centrally funded resource group which provides a mechanism for CCR researchers to obtain many different types of bioinformatics assistance to further their research goals. The group has Read More...
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CREx News & Updates September 2021 Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More NIH Collaborative Research Exchange (CREx) News Site Spotlight FACILITY HIGLIGHTS Learn more about services from the CCR Read More...
Bethesda, MD
Core Facility
The LCBG Microscopy Core offers imaging technologies and training. The Core has established instrumentation for for 2D and 3D imaging of both fixed and living specimens.
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Bioinformatics
05/13/2025 - In this one hour and half hour online training, attendees will apply deep learning to brain MRI images. By the end of this training, attendees will be able to:& Read More...
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Bioinformatics
07/17/2024 - In this one hour and half hour online training, attendees will apply deep learning to brain MRI images. By the end of this training, the attendees will be able to : Read More...
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Bioinformatics
09/17/2025 - Next edition of the NIH HPC Virtual Walk-in Consults! All Biowulf users, and all those interested in using the systems, are invited to call in to our Virtual Walk-in Consult to discuss problems and Read More...
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Bioinformatics
01/14/2026 - Please email staff@hpc.nih.gov for the meeting link. All Biowulf users and all those interested in using the systems are invited to call in to our Virtual Walk-in Consult to discuss problems Read More...
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Bioinformatics
12/10/2025 - All Biowulf users, and all those interested in using the systems, are invited to call in to our Virtual Walk-in Consult to discuss problems and concerns, from scripting problems to node allocation, to strategies Read More...
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Bioinformatics
07/16/2025 - All Biowulf users, and all those interested in using the systems, are invited to call in to our Virtual Walk-in Consult to discuss problems and concerns, from scripting problems to node allocation, to strategies Read More...
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Bioinformatics
06/11/2025 - All Biowulf u er , and all tho e intere ted in u ing the y tem , are invited to call in to our Virtual Walk-in Con ult to di cu problem and concern , from Read More...
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Bioinformatics
04/16/2025 - Please email staff@hpc.nih.gov for the meeting link. All Biowulf users, and all those interested in using the systems, are invited to call in to our Virtual Walk-in Consult to discuss problems Read More...
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Bioinformatics
02/21/2024 - Dear colleagues, The Bioinformatics and Computational Biosciences Branch (BCBB) at NIAID invites you to join us for in-person hands-on workshops that will explore biovisualization techniques. Developers of UCSF ChimeraX and Cytoscape will be on Read More...
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Bioinformatics
04/13/2023 - In this hands-on virtual lab, the participants will familiarize themselves with Deep Learning concepts and techniques, using MATLAB Online to train deep neural networks on GPUs in the cloud, create Read More...
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Bioinformatics
03/15/2023 - This virtual hands-on workshop explores the fundamentals of machine learning using MATLAB. The participants will be introduced to machine learning techniques to quickly explore data, use classification and regression apps to interactively train, compare Read More...
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Bioinformatics
11/17/2022 - In this hands-on virtual lab, the participants will familiarize themselves with Deep Learning concepts and techniques, using MATLAB Online to train deep neural networks on GPUs in the cloud, create deep learning models from Read More...
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Bioinformatics
10/26/2022 - The Division of Cancer Prevention is hosting the Statistical Adjustment for Multiplicity Virtual Workshop from October 26-27, 2022 . Workshop Goal The goal of this workshop is to bring together medical doctors, epidemiologists, and statisticians from Read More...
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Bioinformatics
10/13/2022 - This virtual hands-on workshop explores the fundamentals of machine learning using MATLAB. The participants will be introduced to machine learning techniques to quickly explore data, use classification and regression apps to interactively train, compare Read More...
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Bioinformatics
06/06/2022 - Join the June NCI Imaging and Informatics Community Webinar for a discussion on the recent contributions from Dr. Mirabela Rusu’s Personalized Integrative Medicine Laboratory (PIMed) at Stanford University. Recent laboratory contributions include: registering Read More...
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Bioinformatics
03/29/2024 - This event is sponsored by an organization outside of the NIH; it is listed here due to the nature of the presented topics and their appeal to the NCI community. Description: Recent developments in Read More...
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Bioinformatics
03/06/2024 - The NCI Cancer Diagnosis Program in the Division of Cancer Treatment and Diagnosis is hosting a workshop, “Digital Pathology Imaging (DPI) in Cancer Clinical Trials and Research.” This workshop will Read More...
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Bioinformatics
06/01/2022 - This is an NIH Director’s Lecture. The Director’s Lectures feature leading researchers from around the globe. Nominated by scientists and interest groups throughout NIH, the speakers are specifically approved by the NIH Read More...
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Bioinformatics
09/30/2021 - This NIH-FDA sponsored workshop will bring together members of the scientific community to discuss the obstacles and opportunities associated with NGS and radiomics tool development, validation, and regulatory science. NCI presenters include NCI Director, Read More...
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Bioinformatics
09/29/2021 - This NIH-FDA sponsored workshop will bring together members of the scientific community to discuss the obstacles and opportunities associated with NGS and radiomics tool development, validation, and regulatory science. NCI presenters include NCI Director, Read More...
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Bioinformatics
01/13/2026 - The past decade has witnessed thriving cell atlas research activities in elucidating human cell types and their organization principles. The NIH BRAIN Initiative launched a pilot 3-year BRAIN Initiative Cell Census Consortium (BICCC) in 2014, Read More...
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Bioinformatics
Long reads sequencing analysis using Qiagen CLC Genomics Workbench Thursday, February 12, 2026, 1 PM - 2:30 PM (eastern) This Qiagen hosted virtual training introduces analysis of long reads generated by Oxford Nanopore and PacBio. Learn more and sign Read More...
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Bioinformatics
05/28/2024 - NCI is launching the virtual Cancer AI Conversations series featuring multiple perspectives on timely topics and themes in artificial intelligence for cancer research! Each event features short talks from 2-4 subject matter Read More...
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Bioinformatics
03/26/2024 - NCI is launching the virtual Cancer AI Conversations series featuring multiple perspectives on timely topics and themes in artificial intelligence for cancer research! Each event features short talks from 2-4 subject matter Read More...
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Bioinformatics
01/23/2024 - NCI is launching the virtual Cancer AI Conversations series featuring multiple perspectives on timely topics and themes in artificial intelligence for cancer research! Each event features short talks from 2-4 subject matter Read More...
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Bioinformatics
11/01/2023 - Analysis of medical images such as MRI, CT, X-ray and ultrasound requires a comprehensive environment for data access, visualization, processing, and algorithm development. MATLAB provides tools such as Medical Imaging Toolbox and Deep Learning Read More...
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Bioinformatics
01/08/2026 - Attend this January 8 webinar to tour the immersive workbench of FlowJo TM : a tool for advanced flow cytometry data analysis. Dr. Veronica Obregon-Perko, senior scientific advisor at BD Biosciences, will highlight the software’s Read More...
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Bioinformatics
05/08/2025 - Attend this virtual seminar via Teams. The Division of Intramural Research (DIR) sponsors a monthly series of talks by intramural and special guest speakers celebrating genetics and genomics research. Speakers are selected by NHGRI Read More...
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Bioinformatics
04/17/2025 - Cardinal Bernardin Cancer Center Virtual Grand Rounds Interested in learning about various cancer indicators, approaches for data integration , and how to leverage data to drive scientific discovery? Then join NCI CBIIT’s Read More...
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Bioinformatics
03/26/2025 - Developing artificial intelligence (AI) schemes to assist the clinician towards enabling precision medicine approaches requires development of objective markers that are predictive of disease response to treatment or prognostic of longer-term patient survival. The Read More...
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Bioinformatics
12/12/2024 - Please join us on Thursday, December 12 at 9AM EST for a NCI CCR Liver Cancer Program (LCP) virtual seminar by Dr. Julien Calderaro entitled & Read More...
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Bioinformatics
11/26/2024 - Cancer AI Conversations is a virtual event series featuring timely topics related to the application of artificial intelligence in cancer research. Moderator: Jayashree Kalpathy-Cramer, Ph.D., University of Colorado Additional information can be found Read More...
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Bioinformatics
07/23/2024 - Cancer AI Conversations are virtual events featuring timely topics related to the application of artificial intelligence (AI) in cancer research. This discussion will focus on the impact of AI on cancer health disparities.& Read More...
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Bioinformatics
05/23/2024 - During this virtual conversation of the Cancer Moonshot Seminar Series, Dr. Kai Tan, an investigator with the Human Tumor Atlas Network , and Liz Salmi, a co-investigator and patient advocate with the Participant Engagement and Read More...
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Bioinformatics
03/18/2024 - Electronic lab notebooks (ELNs) are digital tools that allow researchers to record, manage, and share their data and results in a secure and efficient way. The virtual roundtable discussion will cover various aspects of Read More...
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Bioinformatics
The Bioinformatics Training and Education Program is happy to announce open office hours. The BTEP team will be available virtually via Microsoft Teams to help you with your bioinformatics questions / problems from 1 PM to 3 PM , Read More...
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Bioinformatics
11/29/2023 - Join us for the upcoming CCR Fellows & Young Investigators-Seminar Series (CCR FYI-SS 2023/2024) which is being held as a ‘virtual’ seminar that is open to everyone! & Read More...
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Bioinformatics
08/24/2023 - Attend this virtual junior investigator session and hear Oak Ridge National Lab’s Dr. Adam Spannaus and Stanford’s Dr. Chenchen Zhu describe how they use analyses and AI models Read More...
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Bioinformatics
If you experience difficulties with running R on Biowulf, you should: Read the R docs on Biowulf . Contact the HPC team at staff@hpc.nih.gov Attend monthly HPC walk-in virtual consultations Also, please feel Read More...
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Bioinformatics
06/07/2023 - Join us for the upcoming CCR Fellows & Young Investigators-Seminar Series ( CCR FYI-SS 2022/2023 ) which is being held as a ‘ virtual ’ seminar that is open to everyone! Julianna King , Laboratory Animal Sciences Program (LASP) “Genome-wide Read More...
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Bioinformatics
04/13/2023 - The NICHD DIR Tenure-Track Investigator Virtual Symposia Series provides tenure-track investigators within NICHD the opportunity to organize a virtual mini-symposium to showcase their area of science to the NICHD DIR and larger NIH intramural Read More...
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Bioinformatics
02/07/2023 - The National Cancer Institute (NCI) is holding a virtual meeting on February 7-8, 2023 from 12 - 4 PM ET, Variation to Biology: Optimizing Functional Analysis of Cancer Risk Variants , to identify and discuss how best to Read More...
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Bioinformatics
01/25/2023 - These virtual monthly seminars showcase a novel technology being supported through NCI that could transform cancer research and clinical care. During the January seminar, Dr. Jenny Jiang will discuss a newly developed technology to Read More...
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Bioinformatics
05/12/2022 - The Eunice Kennedy Shriver National Institute of Child Health and Human Development (NICHD) Office of the Scientific Director invites you to the Division of Intramural Research (DIR) Tenure-Track Investigator Virtual Symposia Series. Speakers: Timothy Read More...
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Bioinformatics
04/28/2022 - This webinar will provide a foundation on NCI’s Imaging Data Commons (IDC) and NCI Cloud Resources, components of the cloud-based Cancer Research Data Commons (CRDC). All American Association of Physicists in Medicine (AAPM) Read More...
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Bioinformatics
09/09/2021 - Save the date, and plan to join us on September 9, 9:30 a.m.–3:00 p.m. for a free virtual Bioinformatics and Computational Biology Symposium presented by the NIH Library Bioinformatics Support Program. This one-day symposium Read More...
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Bioinformatics
03/24/2026 - Overview This 3-day, virtual workshop will explore how foundation models —a powerful class of advanced AI models —can transform cancer research and clinical care. We will Read More...
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Bioinformatics
02/26/2026 - Scientific discovery is increasingly limited not by data availability, but by our ability to integrate evidence, generate hypotheses, and iteratively test them at scale. Recent advances in foundation models and large language models suggest Read More...
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Bioinformatics
09/09/2025 - https://researchfestival.nih.gov/2025-nih-research-festival Tuesday, September 09, 2025 Wednesday, September 10, 2025 Thursday, September 11, 2025 Friday, September 12, 2025 Tuesday, September 09, 2025 Poster Sessions throughout the day, FAES Terrace (9:00 a.m. - 5:00 p.m.) Morning Session, Bldg. 10, Lipsett Amphitheater (10:00 Read More...
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Bioinformatics
06/11/2025 - This two-hour virtual roundtable discussion will cover development and implementation of artificial intelligence (AI) chatbots at NIH. A chatbot is a software application or web interface designed to have textual or spoken conversations and Read More...
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Bioinformatics
05/27/2025 - Agentic AI is a class of artificial intelligence that acts autonomously to make decisions and take actions to achieve specific goals. During this event, the participants will discuss the emerging role of AI agents Read More...
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Bioinformatics
01/07/2025 - You’re invited to the ChIRP Launch Event! On January 7, 2025, the Office of Intramural Research (OIR) and the Clinical Research Informatics Strategic Planning Initiative (CRISPI) are hosting the virtual Launch Event for Read More...
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Bioinformatics
11/12/2024 - Join us at the upcoming hybrid NIH BRAIN NeuroAI Workshop on November 12 and 13, with virtual access to in-person panels and discussions at the NIH Campus in Bethesda, MD. Artificial intelligence (AI) is reshaping technology Read More...
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Bioinformatics
11/06/2024 - Join Our Training on Spatial Omics Data Analysis with MAWA (Multiplex Analysis Web Apps). Want to learn how to process and analyze your spatial proteomics/transcriptomics data? Join us for four virtual hour-long sessions Read More...
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Bioinformatics
10/29/2024 - Join Our Training on Spatial Omics Data Analysis with MAWA (Multiplex Analysis Web Apps). Want to learn how to process and analyze your spatial proteomics/transcriptomics data? Join us for four virtual hour-long sessions Read More...
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Bioinformatics
10/22/2024 - Join Our Training on Spatial Omics Data Analysis with MAWA (Multiplex Analysis Web Apps). Want to learn how to process and analyze your spatial proteomics/transcriptomics data? Join us for four virtual hour-long sessions Read More...
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Bioinformatics
10/22/2024 - Popular structure prediction program AlphaFold3 and its competitor Chai-1 recently added capabilities to predict 3D RNA structures straight from sequence input. In this talk, we will discuss some test cases for these programs and Read More...
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Bioinformatics
10/15/2024 - Join Our Training on Spatial Omics Data Analysis with MAWA (Multiplex Analysis Web Apps). Want to learn how to process and analyze your spatial proteomics/transcriptomics data? Join us for four virtual hour-long sessions Read More...
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Bioinformatics
09/23/2024 - Come to the Fair! In the morning session, several different groups will speak about their training and education programs. The afternoon session will be devoted to learning about research using AI across Read More...
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Bioinformatics
06/06/2024 - The CCR Genomics Core Facility is pleased to host a virtual technology workshop with EpiCypher on CUT&RUN library prep/sequencing Presentation overview: The location of histone post-translational modifications and chromatin-associated proteins Read More...
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Bioinformatics
The NIH Library provides expert guidance on bioinformatics, biostatistics, data visualization, and data curation throughout the research process. Explore a variety of classes, on-demand trainings, resources, and services related to data science and bioinformatics available Read More...
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Bioinformatics
05/20/2024 - Hybrid (in-person location in Rockville, MD) Virtual attending via WebEx Meeting, link will be available two weeks prior to the meeting date . Attend the 2024 Co-Clinical Imaging Research Resource Program (CIRP) Read More...
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Bioinformatics
03/29/2024 - This first of five webinars will introduce NIH’s All of Us Research Program, including the program’s mission and core values. Learn about the current size and diversity of Read More...
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Bioinformatics
03/27/2024 - This half-day, virtual workshop features representatives from NCI cancer data cloud resources, including the NCI Cancer Research Data Commons (CRDC), Institute for Systems Biology Cancer Gateway in the Read More...
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Bioinformatics
03/06/2024 - The National Institutes of Health (NIH) promotes the use of Common Data Elements (CDEs) to standardize data collection, sharing, and interoperability in health and disease research. In line with Congressional Appropriations language, the Office Read More...
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Bioinformatics
11/30/2023 - Greetings, NCI intramural researchers, Earlier this year we reached out to gather your input on the formation of a bioinformatics community within the NCI Intramural Research Program. Why create such Read More...
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Bioinformatics
09/21/2023 - Picture this… You have large amounts of siloed medical imaging data, but you don’t have the time or budget to manually prepare the images and datasets for annotation and analysis. Don’t you Read More...
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Bioinformatics
09/06/2023 - With the advancements in single cell and spatial profiling technologies and methods, some of us thought it would be helpful to re-establish a community of end users on campus. We invite those that are Read More...
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Bioinformatics
You must be on VPN (Virtual Private Network) or the NIH campus internet to access Biowulf. Request VPN at NCI . If you have a Biowulf account but have not used it in 60 days, please send Read More...
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Bioinformatics
Logging into Biowulf You must be on VPN (Virtual Private Network) or the NIH campus internet to access Biowulf. Request VPN at NCI . If you have a Biowulf account but have not used it in 60 Read More...
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Bioinformatics
08/15/2023 - Picture this… You have large amounts of siloed medical imaging data, but you don’t have the time or budget to manually prepare the images and datasets for annotation and analysis. Don’t you Read More...
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Bioinformatics
08/03/2023 - Identification of evolutionarily related DNA or protein sequences (homologs) is a crucial step in many biology workflows. For example, homologous sequences are used to infer relationships between organisms, understand how sequence changes affect observable Read More...
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Bioinformatics
There are multiple ways to use R on Biowulf. See the HPC documentation . Note R sessions are not allowed on Helix or the login node. All R sessions must use computational nodes. Interactively Your workflow Read More...
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Bioinformatics
07/20/2023 - Picture this… You have large amounts of siloed medical imaging data, but you don’t have the time or budget to manually prepare the images and datasets for annotation and analysis. Don’t you Read More...
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Bioinformatics
06/21/2023 - Picture this… You have large amounts of siloed medical imaging data, but you don’t have the time or budget to manually prepare the images and datasets for annotation and analysis. Don’t you Read More...
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Bioinformatics
02/09/2023 - NCI announces availability of the institute-wide site license for MATLAB that provides access to MATLAB, Simulink, and additional products on government-furnished equipment to all NCI staff, including fellows, contractors, and trainees. These powerful tools Read More...
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Bioinformatics
01/19/2023 - The National Cancer Institute (NCI) has launched a new virtual seminar series titled NCI Rising Scholars: Cancer Research Seminar Series. This monthly seminar series is an opportunity to highlight the research and the important Read More...
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Bioinformatics
10/04/2022 - Speaker: Steven D Cappell NIH Stadtman Investigator Center for Cancer Research – National Cancer Institute – Bethesda MD My laboratory is integrating quantitative image analysis with genetic, biochemical, and systems biology approaches to understand how cells Read More...
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Bioinformatics
06/29/2022 - The CCR Genomics, Sequencing and Single Cell Analysis Core Facilities are pleased to host a virtual technology seminar with Illumina. Presentation overview : For decades cancer methylation studies have provided insights into tumorigenic pathways and Read More...
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Bioinformatics
04/07/2022 - Join Dr. Maryellen L. Giger at the April NCI Imaging and Informatics Community Webinar for a discussion on the development, validation, database needs, and ultimate future implementation of artificial intelligence (AI) in the clinical Read More...
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Bioinformatics
03/08/2022 - Are you interested in growing your data science skills or connecting with like-minded practitioners at NCI? Join us on March 8, 3:00 pm – 4:00 pm ET for a seminar on data science resources available to NCI staff! Read More...
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Bioinformatics
You have to VPN using Cisco AnyConnect Secure Mobility Client . Click Connect button and follow usual instructions. Following NoMachine Installation for Biowulf , double click the connection shortcut. You should see something like below. Fill in Read More...
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Bioinformatics
Running RStudio on Biowulf with NoMachine Using NoMachine to run Rstudio on Biowulf has the benefit of accessing data on the Biowulf/Helix drives. This comes at the cost of setup time and slower responsiveness. Read More...
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Bioinformatics
10/28/2021 - Single-cell RNA sequencing (scRNA-seq) is a relatively new and powerful method in genomics, which enables the interrogation of whole single cellular transcriptomes. The CCR Collaborative Bioinformatics Resource (CCBR) has implemented a basic scRNA-seq workflow, Read More...
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Bioinformatics
10/21/2021 - RNA sequencing (RNA-seq) is a widely used method in genomics, which enables the interrogation of whole cellular transcriptomes. The CCR Collaborative Bioinformatics Resource (CCBR) has implemented a RNA-seq workflow on the NIDAP collaboration platform, Read More...
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Bioinformatics
10/14/2021 - Single-cell RNA sequencing (scRNA-seq) is a relatively new and powerful method in genomics, which enables the interrogation of whole single cellular transcriptomes. The CCR Collaborative Bioinformatics Resource (CCBR) has implemented a basic scRNA-seq workflow, Read More...
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Bioinformatics
10/13/2021 - Register for the 2021 Clinical Proteomics Tumor Analysis Consortium (CPTAC) Virtual Scientific Symposium to hear CPTAC investigators share their latest discoveries in the field of cancer proteogenomics, cancer research, and data analysis tools. In addition Read More...
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Bioinformatics
10/11/2021 - This course uses lectures, demos, and hands-on labs to give you an overview of Google Cloud products and services so that you can learn the value of Google Cloud and how to incorporate cloud-based Read More...
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Bioinformatics
10/08/2021 - Dr. Pjotr Prins and Arun Isaac will present their Concise Common Workflow Language (CCWL). CCWL makes code reusable and adaptable across a variety of software and hardware environment while following FAIR+ (Findable, Accessible, Interoperable, Read More...
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Bioinformatics
10/07/2021 - RNA sequencing (RNA-seq) is a widely used method in genomics, which enables the interrogation of whole cellular transcriptomes. The CCR Collaborative Bioinformatics Resource (CCBR) has implemented a RNA-seq workflow on the NIDAP collaboration platform, Read More...
Web Page
Bioinformatics
09/30/2021 - Single-cell RNA sequencing (scRNA-seq) is a relatively new and powerful method in genomics, which enables the interrogation of whole single cellular transcriptomes. The CCR Collaborative Bioinformatics Resource (CCBR) has implemented a basic scRNA-seq workflow, Read More...
Web Page
Bioinformatics
09/23/2021 - RNA sequencing (RNA-seq) is a widely used method in genomics, which enables the interrogation of whole cellular transcriptomes. The CCR Collaborative Bioinformatics Resource (CCBR) has implemented a RNA-seq workflow on the NIDAP collaboration platform, Read More...
Web Page
Bioinformatics
09/16/2021 - Single-cell RNA sequencing (scRNA-seq) is a relatively new and powerful method in genomics, which enables the interrogation of whole single cellular transcriptomes. The CCR Collaborative Bioinformatics Resource (CCBR) has implemented a basic scRNA-seq workflow, Read More...
Web Page
Bioinformatics
09/02/2021 - RNA sequencing (RNA-seq) is a widely used method in genomics, which enables the interrogation of whole cellular transcriptomes. The CCR Collaborative Bioinformatics Resource (CCBR) has implemented a RNA-seq workflow on the NIDAP collaboration platform, Read More...
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Bioinformatics
Listed below are the video recordings of past BTEP events (classes, seminars, workshops). Videos are hosted on various servers and may play slightly differently. Some videos may be downloaded for local viewing. Recorded Videos of Read More...
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Bioinformatics
Here, we will start with the data stored in a Seurat object. For instructions on data import and creating the object, see an Introduction to scRNA-Seq with R (Seurat) and Getting Started with Seurat: QC Read More...
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Bioinformatics
1. Introduction and Learning Objectives This tutorial has been designed to demonstrate common secondary analysis steps in a scRNA-Seq workflow. We will start with a merged Seurat Object with multiple data layers representing multiple samples that Read More...
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Bioinformatics
Biowulf is the Unix/Linux-based high-performance computing (HPC) cluster at NIH. If you do not currently use Biowulf for your data analysis needs, consider the following advantages: Much more compute power as compared to a Read More...
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Bioinformatics
Lesson 2: Getting Started with R on Biowulf Learning objectives Understand how R can be deployed on Biowulf Understand how to access and use R modules Learn to create a custom R library on Biowulf Deploying Read More...
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Bioinformatics
Lesson 4: Submitting R Scripts via command line Learning Objectives Learn how to use R with less interaction Learn how to deploy sbatch R jobs, and learn about alternatives such as swarm . Learn about R job Read More...