Search Results for: zebrafish genetics

Our operational objectives are to provide state-of-the-art OMICS technologies in support of the Genetics Branch (GB) investigators and collaborators. Research Services Wet Lab Single cell isolation from fresh, frozen, and FFPE tissue, DNA/RNA extractions Read More...

The LCBG Microscopy Core offers imaging technologies and training. The Core has established instrumentation for for 2D and 3D imaging of both fixed and living specimens.

NanoString Technology The nCounter® Analysis System is an automated, multi-application, digital detection and counting system which directly profiles up to 800 molecules simultaneously from a single sample using a novel barcoding technology. Profile hundreds of mRNAs, Read More...

CRISPR/Cas9 genome edited mouse models: Gene Knockout, Knock-In, Conditional Knockout and more

12/14/2021 - Speaker: Alisa Goldstein, Ph.D. Senior Investigator NCI, Division of Cancer Epidemiology and Genetics, Clinical Genetics Branch Dr. Alisa Goldstein is a Senior Investigator in NIH’s Division of Cancer Epidemiology and Genetics (DCEG), Read More...

CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More New CREx Program Manager The CREx Team is happy to announce Deepika Velampati as the new CREx Program Read More...

05/08/2025 - Attend this virtual seminar via Teams. The Division of Intramural Research (DIR) sponsors a monthly series of talks by intramural and special guest speakers celebrating genetics and genomics research. Speakers are selected by NHGRI Read More...

11/07/2024 - Dr. Blackshaw's work investigates the molecular mechanisms controlling neurogenesis and cell fate specification in the vertebrate forebrain, with a particular focus on the retina. He currently focuses on the use of comparative S Read More...

04/11/2024 - Informaticians aim to bring the right information to the forefront at the right time to improve decision-making. Dr. Greene's  lab develops computational methods that integrate distinct large-scale datasets to extract the rich and Read More...

Beta diversity is between sample diversity. This is useful for answering the question, how different are these microbial communities? Image modified from https://www.genome.gov/genetics-glossary/Microbiome We will look into specific metrics of Read More...

Beta diversity is between sample diversity. This is useful for answering the question, how different are these microbial communities? Image modified from https://www.genome.gov/genetics-glossary/Microbiome Beta diversity is measured using distance and Read More...

06/09/2023 - Dr. Nara Sobreira will present "PhenoDB, a phenotypic and genotypic data sharing tool" at the monthly Data Sharing and Reuse Seminar on June 9, 2023, at 12 p.m. EST. About the Seminar This seminar Read More...

05/25/2022 - Are you attending the two-day  CCR-DCEG Health Disparity Workshop ? Consider listening to Dr. Jill Barnholtz-Sloan, CBIIT associate director, give a brief presentation on how  data science  resources can advance cancer health disparity research. Dr. Read More...

12/10/2021 - About the Seminar Dr. Greene plans to discuss the richness of open data resources in biology and how they can support machine learning approaches and be enriched by such methods. He’ll also discuss Read More...

07/26/2021 - The T cell receptor (TCR) repertoire of the adaptive immune system needs broad diversity to recognize any possible pathogen yet must have strategic gaps so as not to attack self.  The potential diversity is Read More...

09/21/2020 - https://cbiit.webex.com/recordingservice/sites/cbiit/recording/play/3f71e6a0573f40b0929aaeb16f22e417 Presenter: Maxwell Lee Laboratory of Cancer Biology and Genetics, NCI/CCR

03/28/2024 - Join John McCulloch and colleagues from the NCI Laboratory of Integrative Cancer Immunology - Microbiome and Genetics Core (LICI-MGC)  in an introduction to JAMS , a comprehensive software package for microbial sequencing analysis (microbiomes and Read More...

03/27/2024 - On Wednesday, March 27th, at 9:00 a.m., in Building 37, Room 4041/4107, and online. In-person attendance is encouraged.  Dr. Khan is the Deputy Chief of the Genetics Branch and Head of the Oncogenomics Section, Read More...

04/13/2023 - The NICHD DIR Tenure-Track Investigator Virtual Symposia Series provides tenure-track investigators within NICHD the opportunity to organize a virtual mini-symposium to showcase their area of science to the NICHD DIR and larger NIH intramural Read More...

03/31/2023 - Alejandro Schäffer, Ph.D., was born in Montevideo, Uruguay, and emigrated with his parents to the United States. He received his B.S. in Applied Mathematics and his M.S. in Mathematics from Read More...

10/25/2022 - Speaker: Jill S. Barnholtz-Sloan, Ph.D. Associate Director Informatics and Data Science at the Center for Biomedical Informatics and Information Technology Senior Investigator Trans-Divisional Research Program, Division of Cancer Epidemiology and Genetics, NCI Dr. Read More...

09/09/2022 - In this session of the University of Alabama at Birmingham’s Informatics Institute PowerTalk Seminar Series, CBIIT’s Dr. Jill Barnholtz-Sloan will emphasize how  big data ’s impact on cancer research has influenced cancer Read More...

09/07/2022 - In this session of the University of Alabama at Birmingham’s O’Neal Research Seminar Series, CBIIT’s Dr. Jill Barnholtz-Sloan will share how  big data  has provided insight on brain and central nervous Read More...

07/14/2022 - Nicholas Navin, Ph.D. Professor, Department of Genetics, Division of Basic Science Research, The University of Texas MD Anderson Cancer Center Grady F. Saunders, Ph.D. Distinguished Professorship for Molecular Biology, Department of Genetics, Read More...

06/15/2022 - During this seminar, Washington University in St. Louis’ Dr. Obi L. Griffith will present  CIViC : an  open access , open source, community-driven web resource for clinical interpretation of variants in cancer. The goal of this Read More...

05/19/2022 - Data is everywhere! In cancer research, data has had an impact on everything from how cancer is diagnosed to how decisions are made about prognosis and treatment. To illustrate the ubiquity of data and Read More...

04/28/2022 - Register for the  April Cancer Genomics Cloud  (CGC) webinar to learn more about how NCI’s  Cancer Research Data Commons  (CRDC) and one of the Cloud Resources are helping researchers with little-to-no-programming skills conduct Read More...

02/17/2022 - Rahul Satija, D.Phil., Core Faculty Member, New York Genome Center, Associate Professor of Biology, Center for Genomics and Systems Biology, New York University (NYU), Associate Faculty, Institute for Systems Genetics, NYU Langone Medical Read More...

10/08/2021 - Dr. Pjotr Prins and Arun Isaac will present their Concise Common Workflow Language (CCWL). CCWL makes code reusable and adaptable across a variety of software and hardware environment while following FAIR+ (Findable, Accessible, Interoperable, Read More...

10/04/2021 - As a continuation of the NHGRI seminar series focused on the “Bold Predictions for Human Genomics by 2030,” please join us for the eighth seminar in the series on Monday, October 4 from 3:00 – 4:30 pm ET. This Read More...

03/08/2021 - Zoom Registration Description NHGRI will host a new seminar series this year on the “Bold Predictions for Human Genomics by 2030” that are described in NHGRI’s “ Strategic Vision for Improving Human Health at the Read More...

02/17/2021 - Speaker is Dr. Michal Linial from the Hebrew University of Jerusalem, Israel. Abstract: Incredible progress has also been made in the field of cancer genetics with the sequencing and molecular profiling of tens of Read More...

02/09/2021 - Sarah Teichmann Head of the Cellular Genetics Programme - Wellcome Sanger Institute - Cambridge UK Lab homepage: https://www.sanger.ac.uk/group/teichmann-group/ Venue: zoom conference https://nih.zoomgov.com/j/1619988709?pwd=dEIwM0 Read More...

01/07/2021 - Presenter: Gary Patti, Ph.D. Departments of Chemistry, Genetics, and Medicine Washington University in St. Louis It is well established that the metabolism of cancer cells is reprogrammed to support the demands of rapid Read More...

11/17/2020 - Register The goal of this meeting is to critically address the wealth of new data generated by bulk and single-cell molecular, imaging and computational approaches that are increasingly revealing how the genome folds to Read More...

11/16/2020 - Register The goal of this meeting is to critically address the wealth of new data generated by bulk and single-cell molecular, imaging and computational approaches that are increasingly revealing how the genome folds to Read More...

11/03/2020 - Register Dr. Christina Curtis is an Assistant Professor in the Departments of Medicine (Oncology) and Genetics in the School of Medicine at Stanford University where she leads the Cancer Computational and Systems Biology Group Read More...

09/21/2020 - Join Zoom Meeting BIO: Jean Claude Zenklusen was born 1964 in Visp, Switzerland. He earned a Master in Sciences (Biochemistry) from the University of Buenos Aires in 1990. He received his PhD in Cancer Biology & Read More...

06/24/2020 - In response to the urgent need for portable real-time epidemiological data analysis, DCEG scientists designed a real-time Mortality Tracker for COVID-19 and other diseases in the United States. This new data distribution method intersects Read More...

06/24/2020 - In response to the urgent need for portable real-time epidemiological data analysis, DCEG scientists designed a real-time Mortality Tracker for COVID-19 and other diseases in the United States. This new data distribution method intersects Read More...

Python is a programming language used in many different applications including data science. It is a high-level computer language, as the syntax is easily read and understood. Python is considered a beginner-friendly language. Python also Read More...

CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More New CREx User Survey The CREx Team is carrying out a CREx User Survey. If you haven’t Read More...

CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More NIH Research Festival The NIH Research Festival highlights the groundbreaking science and the vibrant NIH community driving our Read More...

CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More New NIH Resource Spotlight The NIH Lab Managers Working Group have developed a new NIH-wide database of cold Read More...

CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More New NIH Resource Resources Derive Greater Insights and Accelerate your Research Using Bioinformatic Tools! CREx is an NIH Read More...

CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More New CREx User Survey The CREx Team is carrying out a CREx User Survey. We would greatly appreciate Read More...

The Center for Inherited Disease Research (CIDR)'s  mission is to support the genetics community by providing high-quality, cutting-edge genomics services and technologies in order to expand our understanding of disease and catalyze discoveries that Read More...

CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More Technology Event Biophysical Methods for Protein Interactions Monday, May 15 – Friday, May 19, 2023 This workshop will review the strategies of Read More...

We are a bioinformatics team within the Center for Biomedical Informatics and Information Technology’s (CBIIT’s) Cancer Informatics Branch (CIB)—soon to be referred to as the Informatics and Data Science (IDS) Program. Headed Read More...

BTEP strives to maintain links to resources that should be of interest to CCR Bioinformatics Community.  Some of the resources to will be accessible through more than one of these lists, but since the lists Read More...

01/27/2025 - NCI CCR Liver Cancer Program Seminar Series Dr. Sethupathy is professor of physiological genomics and chair of the Department of Biomedical Sciences at Cornell University. He leads a research lab focused on genome-scale and Read More...

05/02/2024 - The explosion of biomedical big data and information in the past decade or so has created new opportunities for discoveries to improve the treatment and prevention of human diseases. As such, the field of Read More...

01/19/2024 - Trey Ideker, Ph.D., is a professor of medicine, bioengineering, and computer science, and former chief of genetics at the University of California San Diego (UCSD). Additionally, he is director or co-director of the Read More...

Alpha diversity is within sample diversity. When exploring alpha diversity, we are interested in the distribution of microbes within a sample or metadata category. This distribution not only includes the number of different organisms (richness) Read More...

10/13/2023 - Zhiyong Lu, Ph.D. will present AI in Medicine: Improving Access to Literature Data for Knowledge Discovery at the monthly Data Sharing and Reuse Seminar.  The explosion of biomedical big data and Read More...

08/03/2023 - Identification of evolutionarily related DNA or protein sequences (homologs) is a crucial step in many biology workflows. For example, homologous sequences are used to infer relationships between organisms, understand how sequence changes affect observable Read More...

05/09/2023 - If you’re attending the  2023 Organization for the Study of Sex Differences (OSSD) annual meeting  from May 7-11, you’ll have the opportunity to hear about& Read More...

11/17/2022 - Join Icahn School of Medicine at Mount Sinai’s Dr. Zeynep Gümüş to learn about a user-friendly tool she and her team are developing to enable researchers of all computational skill levels to Read More...

04/06/2022 - In this seminar, Dr. Malachi Griffith will: introduce neoantigens, a promising area for cancer immunotherapy and  precision medicine . describe how immunogenomic and bioinformatic approaches are helping to identify neoantigens and therapeutic modalities to target Read More...

02/16/2022 - For our next CDSL webinar we will have a guest lecture by Dr. Leng Han from the Center for Epigenetics and Disease Prevention at Texas A&M University. Abstract: Despite advancements in Read More...

10/20/2021 - Presenter: Trevor Bedford, Ph.D. Associate Professor Vaccine and Infectious Disease Division Human Biology Division Herbold Computational Biology Program Fred Hutchinson Cancer Research Center Genomic epidemiology has enabled critical insights during the COVID-19 pandemic.  Read More...

07/12/2021 - Registration is required for this event Register Here NHGRI will host a new seminar series this year on the “Bold Predictions for Human Genomics by 2030” that are described in NHGRI’s “Strategic Vision for Read More...

06/16/2021 - Register/Join The genetic variation found among individuals results in patterns of polymorphisms passed down through generations. This evolutionary variation typically holds true for individuals, samples from the same population or subpopulation, and cells Read More...

06/10/2021 - Meeting Link:  https://cbiit.webex.com/cbiit/j.php?MTID=mc11b56eb7f7e732aa44c78427402dd2e Abstract: Long read, single molecule sequencing from Pacific Biosciences (PacBio) and Oxford Nanopore are revolutionizing Read More...

04/20/2021 - Register Here Description: Dr. Nicholas Navin is an Associate Professor at MD Anderson Cancer Center, with a joint appointment in the Department of Bioinformatics. He is a faculty member at The University of Texas Read More...

04/05/2021 - Dear colleagues, We'll be hosting a special guest lecture by Prof. John Moult from UMD. Abstract: Computing the three-dimensional structure of a protein molecule from its amino acid sequence is a long-standing grand Read More...

03/12/2021 - Register now at https://nih.webex.com/nih/onstage/g.php?MTID=e8b0c0c0e7a6b9c4d221051fb038e4e59 . This seminar is open to the public, so please feel Read More...

03/05/2021 - Overview: The Human Cell Atlas (HCA) is an ambitious global initiative that aims to create a comprehensive reference map of all human cells—the fundamental units of life—as a basis for both understanding Read More...

The Molecular Signatures Database (MSigDB) is a curated resource of thousands of gene sets by the Broad Institute. These sets were curated for use with GSEA software but are used with other tools as well. Read More...

NISC’s role within NHGRI, and more broadly across NIH, aims to advance genome sequencing and its many applications, with a goal not simply to produce sequence data, but to produce the infrastructure required to Read More...

CREx News & Updates May 2022 Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More Click below to learn how easy it is to navigate the CREx platform. These short videos will Read More...

The Bloomington Drosophila Stock Center (BDSC) collects, maintains, and distributes genetically defined strains of Drosophila melanogaster for research and education. The BDSC supports a large, worldwide community of scientists using Drosophila as a model organism Read More...

The OSTR offers cutting-edge technology platforms to the CCR scientific community through centralized facilities. The videos accessed through this page are designed to introduce the various scientific methodologies OSTR makes available through the cores on Read More...

NCI LASP Genome Modification Core (GMC) is a CCR-dedicated facility that provides advice, training, and reagents to NCI scientists seeking to utilize CRISPR and other nucleases to generate genome modifications in primary cells, cell lines, Read More...

The Genomics Technology Laboratory is an integrated, high-throughput molecular biology laboratory focusing on the development of genetics and genomics technologies, data analysis, and information management tools, in support of CCR Investigators. The laboratory develops integrated Read More...

The Metabolic Clinical Research Unit (MCRU) opened in 2007 as a key component of the Strategic Plan for NIH Obesity Research . The NIDDK worked closely with the Clinical Center to design the Unit, which houses state-of-the-art Read More...

The rapid advancement of single-cell technology has provided new powerful tools to answer many biological questions, such as identifying new or rare cell populations and characterizing the complexities of tumor heterogeneity. Realizing the great potential Read More...

The CCR Microscopy Core provides NCI investigators access to state-of-the-art imaging tools and techniques, including light sheet fluorescence, high-resolution confocal, multi-photon, and super-resolution microscopy. The mission of the CCR Microscopy Core Facility is to support Read More...

Molecular Cytogenetics Core Facility facilitates the assessment of structural and numerical genomic changes in pre-cancer and cancer research models. This core provides comprehensive support for the cytogenetic analysis of cells from human and research animal Read More...

Radiation Oncology Branch is part of CCR. Bioinformatics core is a collaborative resource to support ROB branch and provide service to ROB investigators from NCI and other Institutes access to new technologies, bioinformatics, statistical analysis Read More...

The Division of Veterinary Resources’ (DVR) mission is to contribute to the advancement of NIH biomedical research programs by providing excellence in animal care, customer service, and specialized research services to support intramural research efforts. Read More...

CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More New NIH Resource Resources Advance your research with the NIH Mouse Imaging Facility (MIF) The NIH Mouse Imaging Read More...

The Genomics Laboratory (formerly Laboratory of Molecular Technology) is an integrated, high-throughput molecular biology laboratory focusing on the development of genetics and genomics technologies, together with associated laboratory automation systems, data analysis, and information management Read More...

The Functional Genomics Laboratory (formerly, the RNAi Screening Facility) of the National Center for Advancing Translational Sciences (NCATS) assist investigators with all stages of project planning and execution, beginning with assay development through genome-wide siRNA Read More...

The introduction of DNA sequencing instruments capable of producing millions of DNA sequence reads in a single run has profoundly altered the landscape of genetics and cancer biology. Complex questions can now be answered at Read More...

CREx News & Updates March 2022 Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More Site Spotlight NIA Nonhuman Primate Core The NIA Nonhuman Primate Core supports multi-disciplinary translational aging projects for Read More...

CREx News & Updates December 2021 Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More Site Spotlight FACILITY HIGLIGHTS Learn more about services from the STRIDES Initiative. VIEW STRIDES INITIATIVE NIH Cores Read More...

The Pan-Microbial Serology Facility (PMSF) is part of the Center for Cancer Research (CCR) at the National Cancer Institute (NCI). The PMSF focuses on determining individualized pan-microbial immune profiles associated with human diseases including immunological Read More...

The facilities at AIM are available for use by the entire NIH intramural research community. While we welcome users with any size imaging project, AIM specializes in large, yearlong (or longer), collaborative research efforts with Read More...

The CCR Genomics Core is located in Building 41 on the NIH Bethesda campus. The primary goal of the Core is to provide investigators from CCR/NCI and other NIH Institutes access to genomic technologies and Read More...

Listed below are the video recordings of past BTEP events (classes, seminars, workshops). Videos are hosted on various servers and may play slightly differently. Some videos may be downloaded for local viewing. Recorded Videos of Read More...

Lesson 5: Microbial diversity, alpha rarefaction, alpha diversity Learning Objectives Understand the difference between alpha and beta diversity Introduce several alpha diversity metrics Understand what rarefaction is and why it is important Introduce the debate regarding Read More...

Lesson 6 . Learning Objectives Introduce several beta diversity metrics Discover different ordination methods Learn about statistical methods that are applicable Beta diversity Beta diversity is between sample diversity. This is useful for answering the question, how Read More...

The identification of cell types in single cell genomics data (cell type annotation) can provide new insights into cellular identities, heterogeneity, and functional roles. Cell type annotation is challenging Read More...

06/06/2016 - The 'NCBI Resources for CCR Scientists' workshop, on June 6 and June 8, 2016, will focus on teaching a wide range of resources developed within NCBI that are relevant for CCR scientists. It will include both hands-on Read More...