Search Results for: data

Radiation Oncology Branch is part of CCR. Bioinformatics core is a collaborative resource to support ROB branch and provide service to ROB investigators from NCI and other Institutes access to new technologies, bioinformatics, statistical analysis Read More...

The Science and Technology Research Infrastructure for Discovery, Experimentation, and Sustainability (STRIDES) Initiative The STRIDES Initiative aims to help NIH and its institutes, centers, and offices (ICOs) accelerate biomedical research by reducing barriers in utilizing Read More...

The NCI Clinical Research Correlatives Core provides non-CLIA-certified spectral flow cytometric assays to support clinical trials conducted in the CCR. The core specializes in immunophenotyping and immune monitoring assays. Established Technologies Spectral flow cytometry (Cytek), Read More...

The NIH Metabolomics Consortium (NIH-MC) is a shared research resource that performs metabolomics analysis (and related small molecule research) for investigators at all Institutes and Centers across the NIH Intramural Research Program. The NIH-MC is Read More...

OSTR provides CCR investigators with access to a variety of software licenses for genomic, proteomic, pathway analysis and data visualization tools. These software are funded by OSTR and made available at no cost to CCR Read More...

TCIA is a service which de-identifies and publishes medical images of cancer for download. New data proposals are reviewed by an Advisory Group on a quarterly basis. The data are organized as “collections”; typically, patients’ Read More...

Discover expert help with analysis, processing applications, and licensed software packages.

The Office of Collaborative Biostatistics, Office of the Clinical Director, is the statistical and data management component of CCR. The Section provides statistical leadership and data management consultation for CCR’s major clinical activities and Read More...

What is Xenium? Xenium is a high-resolution, imaging-based in situ spatial profiling technology from 10x Genomics that allows for simultaneous expression analysis of RNA targets (currently in range of 100’s) within the same tissue section. Read More...

CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More NIH Extramural Common Fund Resources Metabolomics Workbench Developed by the NIH Metabolomics Common Fund's National Metabolomics Data Repository ( Read More...

CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More NIH Intramural Core Resources NHGRI Flow Cytometry Core The Core performs high quality single cell analysis through the Read More...

Employing spatial biology techniques enables acquisition of transcript and protein data from intact tissue sections, and in turn, spatial distribution information and cellular interaction patterns are revealed.

We are a bioinformatics team within the Center for Biomedical Informatics and Information Technology’s (CBIIT’s) Cancer Informatics Branch (CIB)—soon to be referred to as the Informatics and Data Science (IDS) Program. Headed Read More...

What is Visium FFPE v2 with CytAssist? Visium FFPE v2 is sequencing-based spatial profiling technology developed by 10x Genomics. This assay can take mouse or human tissue sections on normal glass slides as input and Read More...

The Staff Scientists/Clinicians (SSSC) Technical Enrichment Program (STEP) was established to provide SSSC’s an opportunity to compete for funding to gain comprehensive training in state-of-the-art techniques available through CCR Cores and Facilities. The Read More...

.contrast_primary_button{margin-bottom: 29.124px;margin-top: 0px;} Established in 2016, CREx is an NIH-exclusive online research resource marketplace designed to increase transparency around the advanced technologies and technical expertise available within the Intramural Research Program (IRP). Read More...

The Genomics and Pharmacology Facility is part of the NCI's Center for Cancer Research (CCR), within the Developmental Therapeutics Branch. Its mission is to manage and assess molecular interaction data obtained through multiple platforms, increase Read More...

Large STARS can be used to request supplemental funding exceeding $8,000 to offset experimental costs (e.g., core or vendor services or specialized reagents).  Applications require detailed scientific and budgetary justification and must be proposed in Read More...

Thousands of molecular targets have been measured in the NCI panel of 60 human tumor cell lines. Measurements include protein levels, RNA measurements, mutation status, and enzyme activity levels. You can choose to search for a Read More...

Cores & Facilities From centralized laboratories to collaborative resources and technologies available to CCR Investigators. NCI Cores Centralized laboratories providing broad access to cutting-edge technologies and specialized expertise. Browse NCI Cores Collaborative Resources are technologies and Read More...

CREx News & Updates November 2021 Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More Site Spotlight FACILITY HIGLIGHTS Learn more about services from the NINDS Quantitative Magnetic Resonance Imaging Core. NINDS Read More...

CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More NIH Intramural CryoEM (NICE) Consortium NICE provides NCI, NIAID, NIEHS, NICHD, NIDCR, NEI, and NIA investigators with Read More...

The NIH Center for Human Immunology, Inflammation, and Autoimmunity (CHI) is a trans-NIH resource whose mission is to provide a collaborative hub of advanced translational immunology for NIH clinical and pre-clinical studies. This uniquely structured Read More...

The Antibody Characterization Laboratory (ACL) is the laboratory responsible for the development of well-characterized monoclonal antibody reagents. The NCI’s Office of Cancer Clinical Proteomics Research funds ACL as a resource to the entire cancer Read More...

The Center for Inherited Disease Research (CIDR)'s  mission is to support the genetics community by providing high-quality, cutting-edge genomics services and technologies in order to expand our understanding of disease and catalyze discoveries that Read More...

Discover expert help with analysis, processing applications, and licensed software packages.

The Mass Cytometry Core (MCC) provides access to cutting-edge platforms and expert technical support for high-dimensional single-cell analysis and spatial proteomic profiling. A central expertise of the core is Imaging Mass Cytometry (IMC), which allows Read More...

OSTR offers two distinct supplemental funding mechanisms for CCR PI’s to request additional funds for technologies and research services requiring exceptional costs. Eligible expenses include services from Cores and outside vendors.  A third program ( Read More...

Back Services: This instrument is not user accessible.  We provide both data collection and data analysis services. Location: Building 50, room 3331 Description: An analytical ultracentrifuge is equipped with absorption and interference optical systems that monitor Read More...

CREx News & Updates June 2021 Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More NIH Collaborative Research Exchange (CREx) News Site Spotlight FACILITY HIGHLIGHTS Visit here to learn about services from Read More...

The Functional Genomics Laboratory (formerly, the RNAi Screening Facility) of the National Center for Advancing Translational Sciences (NCATS) assist investigators with all stages of project planning and execution, beginning with assay development through genome-wide siRNA Read More...

CREx News & Updates September 2021 Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More NIH Collaborative Research Exchange (CREx) News Site Spotlight FACILITY HIGLIGHTS Learn more about services from the CCR Read More...

NISC’s role within NHGRI, and more broadly across NIH, aims to advance genome sequencing and its many applications, with a goal not simply to produce sequence data, but to produce the infrastructure required to Read More...

LCMB Microscopy Core offers live cell imaging technologies as well as super-resolution, fluorescence lifetime and confocal imaging systems for immunofluorescence. Our confocal instruments are a Leica SP8 laser scanning confocal microscope and a Nikon spinning Read More...

CREx News & Updates April 2022 Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More Click below to learn how easy it is to navigate the CREx platform. These short videos will Read More...

Back Services: Biophysics Facility offers ITC calorimeters as open-access instruments.  First-time users must complete a short training session before gaining access to the instrument reservation calendar.  Training includes performing a test experiment and Read More...

Back Services: Biophysics Facility offers DSC as an open-access instrument. First-time users must complete training before gaining access to the instrument reservation calendar. Location: Building 50, room 3123 Description: The differential scanning calorimeter measures the constant pressure Read More...

[tabby title="Home"] About NICE-NIH Intramural CryoEM Consortium  NIH Intramural CryoEM Consortium (NICE) serves intramural investigators in all NIH IC’s. NICE provides access to state-of-the-art Titan Krios cryo-electron microscopes for atomic-resolution structure determination of Read More...

.row { display: flex; justify-content: space-around; align-items: flex-start; margin: 20px; } .column { text-align: center; padding: 10px; width: 30%; } .column img { display: block; margin: 0 auto; width: 150px; height: 150px; } .column strong { display: block; margin-top: 10px; } Background: Intravital microscopy (IVM) Read More...

CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More New Resources on CREx NIH NeuroBioBank (NBB) The NBB provides researchers with access to human post-mortem brain tissue Read More...

Home About the Biophysics Core Biophysics Core Technologies We provide consultations and advice on the applications of biophysical methods. If you would like to discuss the requirements of a particular technique or consider selecting the Read More...

The CCR Building 41 Flow Cytometry Core is a full-service facility within the Center for Cancer Research that supports over 150 users representing 26 laboratories. The Core Facility provides instrument and software training, technical expertise, assay development, and Read More...

Protein/Protein Interaction Database Through a license agreement with Elsevier, the CCR community has access to the largest Y2H data set available in the world (CCR Database of Antibodies and Protein Interactions, C-DAPI). This Read More...

CREx News & Updates May 2022 Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More Click below to learn how easy it is to navigate the CREx platform. These short videos will Read More...

The core provides access to several different state-of-the-art 3D microscopes as well as computers to visualize and process image data. The facility houses equipment for 2D or 3D imaging of fixed and living specimens. High Read More...

CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More New NIH Resource Resources Derive Greater Insights and Accelerate your Research Using Bioinformatic Tools! CREx is an NIH Read More...

CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More New NIH Resource Resources Advance your research with the NIH Mouse Imaging Facility (MIF) The NIH Mouse Imaging Read More...

The Crystallization Facility provides an automated environment for setting up crystallization experiments in a high-throughput format, storing the resulting plates under controlled conditions, and monitoring the status of prepared droplets remotely. The Facility is in Read More...

The Spatial Imaging Technology Resource (formerly the Nanoscale Protein Analysis Section of the Collaborative Protein Technology Resource or CPTR) provides expertise and service in state-of-the-art protein analysis technologies to advance CCR research in basic discovery Read More...

In order to meet increasing demands from both NIH intramural and extramural communities for access to a small angle X-ray scattering (SAXS) resource, the Center for Cancer Research (CCR) under the leadership of Drs. Jeffrey Read More...

CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More. New Resources on CREx NIMH Human Brain Collection Core (HBCC) The HBCC obtains human brain tissue, hair, and blood Read More...

The CCR Genomics Core is located in Building 41 on the NIH Bethesda campus. The primary goal of the Core is to provide investigators from CCR/NCI and other NIH Institutes access to genomic technologies and Read More...

CREx News & Updates January 2022 Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More Site Spotlight NCI ANTIBODY CHARACTERIZATION LABORATORY (ACL) The ACL specializes in rigorously validating antibodies for signaling and Read More...

Many established and emerging technologies are available to CCR scientists.  This technology-rich environment makes the CCR a unique place to conduct scientific research.  Through the OSTR, the CCR continues to find Read More...

Total end-to-end system for single-cell research [embed]https://youtu.be/vMzhSzg1rUw[/embed] The BD Rhapsody Single-Cell Analysis system empowers and streamlines your research with a complete system of tools, including reagents and analysis software, Read More...

The Electron Microscopy Core (EMC), formerly known as Electron Microscopy Lab (EML),  offers investigators access to unique expertise and EM technologies that allow CCR Investigators to explore new avenues of research in order to enhance Read More...

In support of Intramural Research Program (IRP) scientists, DOHS provides training, consulting, and resources to ensure that workers' risk to hazards and stresses in the laboratory environment is minimized. Our services include one-on-one consultation with Read More...

CREx News & Updates July 2022 Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More Click below to learn how easy it is to navigate the CREx platform. These short videos will Read More...

Back Services: Biophysics Facility offers Octet as an open-access instrument.  First-time users must complete a short training session before gaining access to the instrument reservation calendar.  Training includes a full analysis of a Read More...

The OSTR offers cutting-edge technology platforms to the CCR scientific community through centralized facilities. The videos accessed through this page are designed to introduce the various scientific methodologies OSTR makes available through the cores on Read More...

The rapid advancement of single-cell technology has provided new powerful tools to answer many biological questions, such as identifying new or rare cell populations and characterizing the complexities of tumor heterogeneity. Realizing the great potential Read More...

CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More NIH Research Festival The NIH Research Festival highlights the groundbreaking science and the vibrant NIH community driving our Read More...

CREx News & Updates October 2021 Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More NIH Collaborative Research Exchange (CREx) News Site Spotlight FACILITY HIGLIGHTS Learn more about services from the CPTR Read More...

September 8, 2022 crex.nih.gov CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More Science & Technology Seminars and Training Events Upcoming Seminars and Educational Opportunities The following Read More...

CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More New CREx User Survey The CREx Team is carrying out a CREx User Survey. If you haven’t Read More...

Back Services: Biophysics Facility offers MST as an open-access instrument.  First-time users must complete a short training session before gaining access to the instrument reservation calendar.  Training includes the KD determination of a Read More...

NIH Intramural CryoEM Consortium (NICE) serves intramural investigators in all NIH IC’s. NICE provides access to state-of-the-art Titan Krios cryo-electron microscopes for atomic-resolution structure determination of protein, macromolecular complexes, membrane receptors, cellular organelles, and Read More...

CCR VOLUME Electron Microscopy Core (CVEMC),  formerly known as volume Electron Microscopy (vEM), aims to develop new techniques in volume electron microscopy (vEM) and, in collaboration with CCR Investigators, apply these techniques to research cell Read More...

The CCR Microscopy Core provides NCI investigators access to state-of-the-art imaging tools and techniques, including light sheet fluorescence, high-resolution confocal, multi-photon, and super-resolution microscopy. The mission of the CCR Microscopy Core Facility is to support Read More...

Services: Biophysics Facility offers CD as an open-access instrument.  First-time users must complete a short training session before gaining access to the instrument reservation calendar. Location: Building 50, room 3123 Description: CD spectroscopy measures the difference Read More...

Back Services: Biophysics Facility offers CD as an open-access instrument.  First-time users must complete a short training session before gaining access to the instrument reservation calendar. Location: Building 50, room 3123 Description: CD spectroscopy measures the Read More...

The Frederick Sequencing and Genomics Core (FSGC) was established through the integration and consolidation of the former Sequencing Facility (SF) and the Genomics Technology Laboratory (GTL). The new FSGC eliminates redundancy and provides cutting edge Read More...

The Biophysics Resource (BR) was established in January 2001. Our mission is to provide CCR investigators with access to both the latest instrumentation and expertise in characterizing the biophysical aspects of systems under structural investigation. The Read More...

As a multi-user facility, the different instruments provide a wide range of imaging modes for EIB scientists, from standard immunohistochemistry, through brightfield and wide-field epifluorescence imaging, to highly complex live cell confocal microscopy and super-resolution Read More...

The Mouse Metabolic Phenotyping Center (MMPC)Live Program provides standardized, high quality, unique, and hard to find phenotyping services for mouse models of diabetes, obesity, and related metabolic disorders. Emerging as the next iteration of Read More...

The Clinical Support Laboratory offers processing, tracking, and testing of a broad range of clinical samples. Support can begin at the early stages of clinical trial development to aid in developing a comprehensive strategy for Read More...

The PPS encompasses all scientific analyses related to pharmacology, once the specimen has been collected and stored. There is a multi-step process to evaluate how the drug is being handled by the body after administration. Read More...

Back Services: Biophysics Facility offers MP as an open-access instrument.  First-time users must complete a short training session before gaining access to the instrument training calendar.  Training includes mass distribution analysis of a Read More...

The NCI High-Throughput Imaging Facility (HiTIF) works in a collaborative fashion with NCI/NIH Investigators by providing them with the necessary expertise, instrumentation, and software to develop and execute advanced High-Throughput Imaging (HTI) assays. These Read More...

CREx Monthly Newsletter Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More New NIH Resource Spotlight The NIH Lab Managers Working Group have developed a new NIH-wide database of cold Read More...

The Division of Veterinary Resources Animal Surgery has supported large animal research and clinical care for more than 40 years. DVR surgeons provide outstanding and highly specialized large animal (rabbits, ungulates, etc.) research support in a Read More...

CREx News & Updates February 2022 Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More Site Spotlight ORS Division of Veterinary Resources (DVR) DVR is the central NIH lab animal support program Read More...

The NIH Biowulf Cluster provides researchers with a world-class system to assist in solving complex biomedical problems as diverse as gene variation in worldwide human populations, deep learning to model protein structures, and PET brain Read More...

CREx News & Updates December 2021 Learn about the NIH Collaborative Research Exchange (CREx), Core Facilities, Webinars, & More Site Spotlight FACILITY HIGLIGHTS Learn more about services from the STRIDES Initiative. VIEW STRIDES INITIATIVE NIH Cores Read More...

Home About the Biophysics Core Biophysics Core Services [tabby title="Instrumentation"] NHLBI Biophysics Core The Biophysics Core Facility: Overview Core Facilities provide scientific resources, cutting-edge technologies and novel approaches to support DIR scientists. Availability of Read More...

Back Services: We offer a limited sample processing service using standard SEC-MALS and FFF protocols.  This service is intended for the occasional users of this system.  Researchers who expect to use this instrument Read More...

Back Services: We offer a limited sample processing service using standard SEC-MALS and FFF protocols.  This service is intended for the occasional users of this system.  Researchers who expect to use this instrument Read More...

The facilities at AIM are available for use by the entire NIH intramural research community. While we welcome users with any size imaging project, AIM specializes in large, yearlong (or longer), collaborative research efforts with Read More...

No summary available.

2024 Date: Tuesday, October 15, 2024 Time and Location: 11 am EST, ZOOM (INVITATION BY LMIG LIST SERVER) Speaker: Dr. Diego Presman (U Buenos Aires) Title: “Insights on Glucocorticoid Receptor Activity Through Live Cell Imaging” Summary: Eucaryotic transcription factors ( Read More...

No summary available.

Home Please watch the following instructional video to learn how to order and reserve microscopes usinf BookItLab

Our Mission The NCI Optical Microscopy Cores are instrumental in advancing cancer research through optical measurements and analysis. Serving the Center for Cancer Research community, which is home to approximately 250 Principal and Senior Investigators across 50 Read More...

No summary available.

06/18/2026 - Partek Flow is a point-and-click platform for building analysis workflows for Next Generation Sequences (NGS), including DNA, bulk and single-cell RNA, spatial transcriptomics, ATAC, and ChIP, helping scientists avoid the steep learning curve of Read More...

04/16/2026 - The ability to measure gene expression levels for individual cells (vs. pools of cells) and with spatial resolution is crucial to address many important biological and medical questions, such as the study of stem Read More...

03/19/2026 - In this talk, Dr. Carey will describe how Bioconductor approaches new challenges in supporting open method development and reproducible analyses in genomic data science. He will discuss aspects of the project that bear on Read More...

03/11/2026 - This one-hour online training, the second session of the two-part series,  focuses on reshaping and enriching the cleaned patient dataset to prepare it for analysis and reporting. Attendees will practice splitting and Read More...

03/10/2026 - This one-hour online training, is the first of a two-part series, which introduces participants to cleaning and exploring a patient health dataset using Python and pandas. Attendees will load tabular data, inspect structure and Read More...

02/23/2026 - This one and a half hour online training equips participants with powerful data wrangling techniques using R and the tidyverse ecosystem. The tidyverse is a cohesive ecosystem of R packages designed to make data Read More...

02/11/2026 - This hour and half online training is part two of an introductory two-part series for those who want to learn about research data management and sharing, or for those who are interested in a Read More...

02/11/2026 - Streamlining Data Sharing: Practical Tools and Researcher Stories from the NIH GREI Webinar 2 This session will help you make your dataset more FAIR. We will walk through GREI's Data Submission Checklist (https://doi. Read More...

02/10/2026 - This one-hour and thirty minute online training is part one of an introductory two-part series for those who want to learn about research data management and sharing, or for those who are interested in Read More...

02/09/2026 - This hour-and-a-half online training will examine how humans process and encode visual information and how visual attributes can be utilized to create effective visualizations. This will focus on enhancing graphic literacy, exploring methods for Read More...

02/09/2026 - This one-hour online training provides researchers with an overview of online resources for locating research datasets, data repositories, and data publications for data sharing and re-use. Participants will learn search strategies for locating datasets Read More...

01/29/2026 - In the final class of the Statistical Analysis of Research Data (SARD) series offered by NCI Center for Cancer Training participants will learn about: Multivariant data analysis Regression Non-parametric tools Goodness of fit tests Read More...

01/28/2026 - Navigating Risk in Sharing Cancer Data: Sharing cancer data accelerates scientific discovery and promotes innovation across disciplines, which brings complex ethical, legal, and procedural challenges. This panel will share practical experiences; current Read More...

01/28/2026 - Learn about Data Science from Dr. Mark Jensen, Director of Data Science, Center for Operations and Technical Support (CTOS), Bioinformatics and Computational Science (BACS), Leidos Biomedical Research, Inc.

01/27/2026 - Join the NCI Cohort Consortium for a webinar on innovative approaches to improving data interoperability across cohort studies. The session will highlight efforts to apply the Observational Medical Outcomes Partnership Common Data Model to Read More...

01/21/2026 - This is the first class of the Statistical Analysis of Research Data (SARD) series offered by NCI Center for Cancer Training. The focus for this session is univariate data analysis and participants will learn Read More...

01/21/2026 - This one-hour online training offers an overview of the NIH-sponsored Generalist Repository Ecosystem Initiative (GREI) (Dataverse, Dryad, Figshare, Mendeley Data, Open Science Framework, Vivli, and Zenodo), and the role of participating in these repositories Read More...

01/16/2026 - Part of the Childhood Cancer Data Initiative (CCDI) Webinar Series During this webinar, experts from the USC Norris Comprehensive Cancer Center (NCCC) and Children's Hospital Los Angeles (CHLA) will present: An overview of Read More...

01/16/2026 - This one-hour online training introduces applying data science and artificial intelligence (AI) techniques to signals and time-series datasets using MATLAB. The training will cover the entire AI pipeline, from signal exploration to deployment. Participants Read More...

01/15/2026 - The “NIH Data Science Trainers Group” invites you to join us. We meet monthly (3 rd Thursday, 3-4 PM) on topics of interest within the bioinformatics and data science training community. Read More...

01/14/2026 - This one-hour online training, provided by SAS, will review multiple ways to combine SAS data sets. By the end of this training, attendees will be able to: Utilize Concatenation on SAS data sets (SET Read More...

01/08/2026 - Attend this January 8 webinar to tour the immersive workbench of FlowJo TM : a tool for advanced flow cytometry data analysis. Dr. Veronica Obregon-Perko, senior scientific advisor at BD Biosciences, will highlight the software’s Read More...

12/16/2025 - This one and a half-hour online training covers the basic principles of FAIR (Findable, Accessible, Interoperable, Reusable) data and why it is important to make your data FAIR.    By the Read More...

12/11/2025 - If you’re interested in learning how machine learning can help you tap into the rich data within electronic health records, join us to learn more about the “Memorial Sloan Read More...

12/10/2025 - Join us as poster presenters from the ODS Symposium showcase innovative work that highlights powerful resources, inspiring examples, and the far-reaching impact of data sharing and reuse. Moderators: Ying Huang and Mousumi Read More...

12/09/2025 - This one-hour online training will provide a high-level overview of Python coding concepts, as well as some of the integrative development environments (IDEs, such as Jupyter notebooks ) used for Python coding. Python is a Read More...

12/02/2025 - If you are looking for computational tools for your cancer research, join us for this upcoming training session on Galaxy, an open-source and browser-based computational platform. Dr. Jeremy Goecks, an NCI grantee and Assistant Read More...

11/20/2025 - This one-hour online training offers an overview of the NIH-sponsored Generalist Repository Ecosystem Initiative (GREI) (Dataverse, Dryad, Figshare, Mendeley Data, Open Science Framework, Vivli, and Zenodo), and the role of participating in these repositories Read More...

11/04/2025 - This one-hour online training will provide a high-level overview of Python coding concepts, as well as some of the integrative development environments (IDEs,  such as Jupyter notebooks ) used for Python coding. Python Read More...

10/29/2025 - This one-hour online training provides researchers with an overview of online resources for locating research datasets, data repositories, and data publications for data sharing and re-use. Participants will learn search strategies for locating datasets Read More...

10/28/2025 - This one-hour and fifteen minute online training is part two of an introductory two-part series for those who want to learn about research data management and sharing, or for those who are interested in Read More...

10/27/2025 - This one-hour and thirty minute online training is part one of an introductory two-part series for those who want to learn about research data management and sharing, or for those who are interested in Read More...

10/08/2025 - This one-hour online training equips participants with powerful data wrangling techniques using R and the tidyverse ecosystem. The tidyverse is a cohesive ecosystem of R packages designed to make data science workflows more intuitive Read More...

10/01/2025 - This one-hour online training, provided by SAS, will review multiple ways to combine SAS data sets. By the end of this training, attendees will be able to: Utilize Concatenation on SAS data sets (SET Read More...

09/29/2025 - The "Data Visualization in R" series focuses on using ggplot and the broader tidyverse ecosystem to create insightful and customizable visualizations. It covers key principles of data visualization, from basic plots to Read More...

09/29/2025 - Plea e u e thi link to acce overview, regi tration, and other information: http ://event .cancer.gov/nci/od -data-jamboree Childhood cancer i a rare di ea e with ~15,000 ca e diagno ed Read More...

09/22/2025 - The "Data Visualization in R" series focuses on using ggplot2 and the broader tidyverse ecosystem to create visualizations. Attendees will progress from foundational plotting techniques to advanced customization, learning to create multi-faceted Read More...

09/22/2025 - This one-hour online training introduces applying data science and artificial intelligence (AI) techniques to signals and time-series datasets using MATLAB. The training will cover the entire AI pipeline, from signal exploration to deployment. Participants Read More...

09/17/2025 - In this BTEP Coding Club, participants will see how Pandas, a data wrangling package for Python enables extraction of insights from and telling of a cogent story with data. Topics to be discussed include Read More...

09/17/2025 - This hour and a half online training covers how to analyze and model data using interactive tools in MATLAB. Through live demonstrations and examples, attendees will learn to solve many steps in a data Read More...

09/17/2025 - This one-hour online training will provide a high-level overview of Python coding concepts, as well as some of the integrative development environments (IDEs,  such as Jupyter notebooks ) used for Python coding. Python Read More...

09/16/2025 - Federated data analysis allows for collaboration and analysis across institutions without physically moving individual-level data to a central location, thus protecting sensitive data and maintaining data security. Join the NCI Cohort Consortium for an Read More...

09/15/2025 - This hour-and-a-half online training will examine how humans process and encode visual information and how visual attributes can be utilized to create effective visualizations. This will focus on enhancing graphic literacy, exploring methods for Read More...

09/10/2025 - The National Center for Biotechnology Information (NCBI) is hosting a workshop at the NIH Research Festival 2025! This hands-on workshop, led by experts from the NIH Sequence Read Archive (SRA), will guide researchers through the Read More...

09/09/2025 - This session will provide an introduction to statistical tests for categorical/count data. We will cover basic theory and implementation of the Chi Square test, Fisher’s exact test, and the Hypergeometric Read More...

08/21/2025 - This one-hour online training provides researchers with an overview of online resources for locating research datasets, data repositories, and data publications for data sharing and re-use. Participants will learn search strategies for locating datasets Read More...

08/08/2025 - Dr. Jay Patel is a clinician-scientist uniquely trained in both dentistry and informatics/computer science. As the Director of Artificial Intelligence (AI), Data Science, and Informatics, he leads efforts to reuse and integrate real-world Read More...

08/07/2025 - Thi one-hour online training will provide a high-level overview of Python coding concept , a well a ome of the integrative development environment (IDE ,&nb p; uch a Jupyter notebook ) u ed for Python Read More...

07/29/2025 - Globus is a GUI-based software suitable for efficiently transferring large datasets such as those generated from Next Generation Sequencing (NGS) to and from high performance computing systems (ie. NIH’s Biowulf). This demonstration only Read More...

07/28/2025 - The "Data Vi ualization in R" erie focu e on u ing ggplot and the broader tidyver e eco y tem to create in ightful and cu tomizable vi ualization . It cover Read More...

07/24/2025 - NIDDK Biostats Seminar Series: From Research Study Design to Collecting, Managing, and Analyzing Data. Learning Objectives: 1. To delineate features of REDCap to support project management for research studies. 2. To outline steps to create detailed Read More...

07/24/2025 - The "Data Vi ualization in R" erie focu e on u ing ggplot and the broader tidyver e eco y tem to create in ightful and cu tomizable vi ualization . It cover Read More...

07/23/2025 - This presentation will explore the next emerging stage where biobanking is characterised by being part of system - Biobanking 4.0. Biobanking has always been about data generation with tissue specimens providing the biological and genomic Read More...

07/22/2025 - Thi one and a half-hour online training cover the ba ic principle of FAIR (Findable, Acce ible, Interoperable, Reu able) data and why it i important to make your data FAIR.&nb p; Read More...

07/22/2025 - Con ideration for protecting private data when training AI model i a topic of increa ing concern. During thi event, participant will di cu the u e of ynthetic data for privacy-pre erving AI.

07/15/2025 - This is the final lesson in the course Introductory R for Novices: Introduction to Data Wrangling. This lesson will show attendees how to join multiple data frames and transform and create new variables using Read More...

07/08/2025 - This lesson will introduce the "split-apply-combine" approach to data analysis and the key players in the dplyr package used to implement this type of workflow.

07/07/2025 - Thi hour-and-a-half online training will examine how human proce and encode vi ual information and how vi ual attribute can be utilized to create effective vi ualization . Thi will focu on enhancing graphic literacy, Read More...

07/01/2025 - Thi le on will introduce the tidyver e package, dplyr . Attendee will primarily learn how to filter row and elect column from data frame .  

07/01/2025 - Learn how to vi ualize equencing and analy i re ult effectively. Thi e ion de cribe the application of the web-ba ed interactive OmicCirco in R hiny to con truct circular plot with Read More...

06/27/2025 - This one-hour and fifteen minute online training is part two of an introductory two-part series for those who want to learn about research data management and sharing, or for those who are interested in Read More...

06/26/2025 - This one-hour and half minute online training is part one of an introductory two-part series for those who want to learn about research data management and sharing, or for those who are interested in Read More...

06/24/2025 - In thi le on, we will learn how to tidy me y data u ing function from the tidyver e package, tidyr .  The primary focu will be on re haping data from wide to Read More...

06/18/2025 - This one-hour online training will provide a high-level overview of Python coding concepts, as well as some of the integrative development environments (IDEs,  such as Jupyter notebooks ) used for Python coding. Python is a Read More...

06/17/2025 - Thi le on will introduce the philo ophy of tidy data and key concept and package u ed for data wrangling with R. 

06/13/2025 - Dr. Fuhai Li,&nb p;A ociate Profe or at the chool of Medicine and Computer cience & Engineering, Wa hington Univer ity, will pre ent novel approache that combine large language Read More...

06/12/2025 - Thi cla will wrap up the Python Introductory Education erie by howing participant how to create data vi ualization . Experience with Python i not needed for attendance. Participant are required to have acce to Read More...

06/10/2025 - Thi cla of the Python Introductory Education erie will introduce participant to working with and wrangling tabular data u ing the package, Panda . Experience with Python i not needed for attendance. Participant are required Read More...

06/05/2025 - In the econd cla of the Python Introductory Education erie , participant will tart to dive into Python. Participant will walk away with knowledge of common Python data type and tructure a well a how Read More...

05/29/2025 - Thi e ion i geared toward re earcher wanting to under tand and implement the kill and competencie needed to make biomedical and behavioral re earch data FAIR and AI-ready, including: FAIR principle and Read More...

05/14/2025 - Please note: Registration is required to get the Meeting Link for this event. Please pre-register. The Human Tumor Atlas Network (HTAN) is a National Cancer Institute (NCI)-funded initiative to construct 3-dimensional atlases of Read More...

05/13/2025 - In this one hour and half hour online training, attendees will apply deep learning to brain MRI images.   By the end of this training, attendees will be able to:& Read More...

05/08/2025 - This one-hour online training will provide a high-level overview of Python coding concepts, as well as some of the integrative development environments (IDEs,  such as Jupyter notebooks ) used for Python coding. Python is a Read More...

05/06/2025 - This is the last lesson in Part 1 of Introductory R for Novices: Getting Started with R. This lesson will focus exclusively on working with data frames. Attendees will learn how to examine, summarize, and Read More...

05/01/2025 - This lesson will introduce data structures including data frames and show attendees how to import data into the R environment. 

05/01/2025 - In this webinar, the participants will learn about application of machine learning methods, specifically geared towards predicting the toxicity of target molecules. They will gain insights into various machine learning techniques, fostering a comprehensive Read More...

This is part II of the article highlighting nf-core pipelines and specifically addresses the use of these pipelines in the DNAnexus cloud environment. Part I of the article can be found in the October 2023 topic Read More...

nf-core is a community effort to generate a curated set of standardized, best-practice, reproducible, documented, NGS analysis pipelines. All these workflows are built using the versatile workflow manager, Nextflow , and have been released under the Read More...

04/24/2025 - In this lesson, attendees will learn the most basic features of the R programming language. The focus will be on R syntax, R objects, and data types. 

04/17/2025 - Cardinal Bernardin Cancer Center Virtual Grand Rounds Interested in learning about various cancer indicators, approaches for data integration , and how to leverage data to drive scientific discovery? Then join NCI CBIIT’s Read More...

04/15/2025 - What to bring:  Laptop capable of connecting to internet via NIH  wifi Are you looking to expand the reach of your sequencing to enable what long read technologies can provide?& Read More...

04/09/2025 - We will share the summary and feedback from Enhancing Data Reuse in Cancer Research Workshop Series hosted by our office in June and July 2024. Join us as we explore: feedback from NCI Data Reuse Read More...

04/09/2025 - Dr. Aristotelis Tsirigos will present a seminar titled "Investigating the role of 3D chromatin in gene regulation using data integration and machine learning" for the LRBGE Seminar Series.

04/09/2025 - Please note: Registration is required to get the Meeting Link for this event. Please pre-register. The Human Tumor Atlas Network (HTAN) is a National Cancer Institute (NCI)-funded initiative to construct 3-dimensional atlases of Read More...

04/02/2025 - Please note: Registration is required to get the Meeting Link for this event. Please pre-register. The Human Tumor Atlas Network (HTAN) is a National Cancer Institute (NCI)-funded initiative to construct 3-dimensional atlases of Read More...

03/19/2025 - Please note: Registration is required to get the Meeting Link for this event. Please pre-register. The Human Tumor Atlas Network (HTAN) is a National Cancer Institute (NCI)-funded initiative to construct 3-dimensional atlases of Read More...

03/13/2025 - This session will introduce participants to visualizing alignment results from Next Generation Sequences using the Integrative Genomics Viewer (IGV). This step is important as scientists may want to highlight results from certain genomic locations Read More...

03/13/2025 - UCSC Xena showcases seminal cancer genomics datasets from The Cancer Genome Atlas (TCGA) and the Pan-Cancer Atlas, as well as the Genomic Data Commons, Pan-cancer Atlas of Whole Genomes, and the International Cancer Genome Read More...

03/04/2025 - Alignment of RNA sequencing data enables researchers to identify where in the genome each sequence came from. However, it does not inform of how many sequences aligned to each genomic feature such as a Read More...

02/27/2025 - NGS produces millions of sequences per sample and the challenge is to identify where in the genome each sequence came from. Fortunately, there are aligners that help scientists with this task. After this class, Read More...

02/25/2025 - Quality assessment may reveal low quality sequences and/or contaminations such as adapters in NGS data. Therefore, it is important to perform cleanup to ensure that the input for downstream analyses tools is of Read More...

02/20/2025 - This class will introduce the first step in analyzing NGS data using bulk RNA sequencing as an example. After attending, participants will be able to describe the file format in which NGS data is Read More...

02/11/2025 - This lesson is part of a course, B4B: Unix and Biowulf.    This course will focus on developing command line skills, getting started and working on Biowulf (the NIH HPC cluster), and downloading and Read More...

01/28/2025 - This talk will cover how our group uses the resources of the FRCE cluster to process cryo-electron microscopy data collected in-house. This session is geared towards beginner users. This session will be recorded, and Read More...

01/23/2025 - The "Data Visualization in R" series focuses on using ggplot and the broader tidyverse ecosystem to create insightful and customizable visualizations. It covers key principles of data visualization, from basic plots to Read More...

01/22/2025 - This three hour online training covers QIAGEN’s CLC Genomics Workbench enables researchers to analyze NGS data without the use of command line and is a powerful tool for determining differential expression. Read More...

01/22/2025 - Alzheimer’s Disease (AD) presents significant challenges in prevention and treatment despite decades of research advancements. Innovative AI/ML approaches enable analysis of real-world data sources, such as electronic health records (EHRs) Read More...

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02/12/2026 - The NLM Division of Intramural Research (DIR) is pleased to welcome Tiarnán Keenan, MD, PhD, Stadtman Tenure-Track Investigator and Director of the Medical Retina Fellowship Program at the National Eye Institute Read More...

01/13/2026 - The past decade has witnessed thriving cell atlas research activities in elucidating human cell types and their organization principles. The NIH BRAIN Initiative launched a pilot 3-year BRAIN Initiative Cell Census Consortium (BICCC) in 2014, Read More...

03/19/2025 - This one hour and a half online training provides an accessible introduction to artificial intelligence (AI) using MATLAB. Designed for beginners, the session covers fundamental concepts in AI and machine learning, introduces intuitive tools Read More...

Sign-Up for Microscopes and Computers Sign-up for EIB Microscopy Facility microscopes and image processing workstations is mandatory – please e-mail facility manager (“Contact” tab) and include your preferred date/time etc. Your request will be confirmed Read More...

Image Analysis Signals Imaging Artist Next generation image analysis and management platform for high-content screening and cell imaging data. Quickly process, analyze, share, and store the vast volumes of data. Cell Profiler CellProfiler is free, Read More...

Image Analysis Capabilities: Custom Development Software Supported Software Platforms Arivis Vision 4D Arivis is software for image processing, analysis, and display for working with multi-channel 2D, 3D and 4D images of almost unlimited size independent Read More...

Training We recommend that users become familiar with the principals of fluorescence labeling and optical microscopy before arranging for training. We recommend the following sites for learning about microscopy: Introductions to Fluorescence Microscopy Fluorescence Labeling Read More...

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HALO HALO is a powerful 2D image analysis tool with AI capabilities to perform annotations and analysis on bright-field and immunofluorescent images for digital pathology and numerous other applications.  It offers a set of algorithms Read More...

Multicolor imaging Fluorescence imaging is used for protein localization and colocalization in 3D. Multi-color imaging is necessary to observe colocalization of several proteins in the same cell. Many fluorescent proteins are now available for multi-color Read More...

Training Contact the LCBG Microscopy Core to discuss your experiment: Meet with Ross Lake, Core Head, to discuss your specific project. If the project is feasible, schedule an appointment to receive training and use the Read More...

Techniques The Laboratory of Cancer Biology and Genetics Microscopy Core houses multiple systems that can be used to analyze cell structure, protein expression, and cell dynamics using immunofluorescence. These include inverted epifluorescence microscopes, a confocal Read More...

Our Team Tatiana S. Karpova Ph.D.Core Headkarpovat@nih.govBuilding 41, Room C615240-760-6637 David A. Ball Ph.D.Core Biologistballa@nih.govBuilding 41, Room B114D240-760-6577 Mohamadreza Fazel, Ph.D.Core Biologistmohamadreza. Read More...

Software Image Acquisition Commercial imaging systems of LRBGE Optical Microscopy Core are controlled by acquisition software specifically designed for the appropriate microscope, such as ZEN (Zeiss confocal microscopes), Nikon Elements (Nikon), Imspector (Abberior). Custom-built HILO Read More...

General Usage Policies Principal investigators should read this document and sign it. PI’s/postdocs should attach a short-written summary of the project to the signed doc. If the project changes, Read More...

WIDE-FIELD MICROSCOPY Nikon Ti 2000 wide-field microscope Capabilities: This microscope is suited for live cell imaging (4D) and fixed cells (3D) imaging. This microscope produces high quality wide-field images that may be improved by Read More...

Software LAS Leica Application Suite X (LAS X) is the one software platform for all Leica microscopes: It integrates confocal, wide field, stereo, super-resolution, and light-sheet instruments from Leica Microsystems. MetaMorph The MetaMorph® Microscopy Automation Read More...

Leica SP8 LSCM with white light laser The SP8 LIGHTNING confocal microscope allows you to make proper and detailed observations of fast biological processes. Your experimental work will have the benefit of super-resolution, high-speed imaging, Read More...

Macro’s for Image Processing Dr. Wisniewski wrote a number of custom ImageJ Macros aimed at streamlining image processing tasks such as: Software Imaris The world’s leading Interactive Microscopy Image Analysis software company, actively Read More...

Gianluca Pegoraro, PhD gianluca.pegoraro@nih.gov Facility Head 240-760-6696 Bldg. 41, Room B909 Dr. Pegoraro received his Ph.D. in Molecular Genetics from the International School of Superior Studies in Trieste, Italy in 2004. After Read More...

Gianluca Pegoraro, PhD gianluca.pegoraro@nih.gov Facility Head 240-760-6696 Bldg. 41, Room B909 Dr. Pegoraro received his Ph.D. in Molecular Genetics from the International School of Superior Studies in Trieste, Italy in 2004. After Read More...

A typical HTI screening project at HiTIF can be subdivided in 5 phases: Pre-Development The investigator contacts the Facility Head to inquire about the current availability of instrumentation time and manpower for the project to be Read More...

Our Team Michael Kruhlak, Ph.D.Core Headkruhlakm@nih.govBuilding 37, Room B114E240-858-3342 Dr. Kruhlak received his Ph.D. from the Department of Biochemistry and Molecular Biology at The University of Calgary Medical Read More...

iLab The NCI Microscopy Core is using a new system to reserve a microscope. Use this link to access the iLab software. Training Contact the CCR Microscopy Core to Discuss your Experiment: Registration and Making Read More...

Software Several software packages are available to users Arivis Vision 4D Arivis Vision4D is a modular software for working with multi-channel 2D, 3D and 4D images of almost unlimited size independent of Read More...

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empanada v1.2 now released empanada-napari now comes with: MitoNet v1, NucleoNet v0.1 and DropNet v0.1(and other new useful modules) Empanada (EM PANoptic Any Dimension Annotation) is a tool Read More...

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